DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cv-2 and Fcgbpl1

DIOPT Version :9

Sequence 1:NP_524809.2 Gene:cv-2 / 45280 FlyBaseID:FBgn0000395 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_001158128.1 Gene:Fcgbpl1 / 292746 RGDID:1311906 Length:2581 Species:Rattus norvegicus


Alignment Length:631 Identity:164/631 - (25%)
Similarity:243/631 - (38%) Gaps:197/631 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 GSEWNDPE-DPCKTYKCVATVVTETIQKCYSQCDNNQLQPPRPGECCPTC--------QG---C- 184
            |..|..|. ||.                |:::|..:          ||||        :|   | 
  Rat  1420 GGSWQVPGWDPL----------------CWNECQGS----------CPTCPEDRVEEYEGPGFCG 1458

  Fly   185 KINGQTV---AEGHE-------VDASIDDRCL-----------------VCQCRG-------TQL 215
            .::..||   |..|.       ....:.|.||                 .||..|       ||.
  Rat  1459 PLSPDTVGPFASCHSHVPPESFFKGCVLDLCLGGQVKDILCQALAAYAEACQAHGIKIQDWRTQA 1523

  Fly   216 TCSKKTCPVLPCPMSKQIKRPDECCPRCPQNHSFLPVPGKCLFNKSVYPEKTQFMPDRCTNCTCL 280
            .|.      :.||.:...   :.|.||||.:         |       |..|:..|....:..|:
  Rat  1524 GCE------ISCPDNSHY---ELCGPRCPVS---------C-------PPPTRHNPPTACDGPCV 1563

  Fly   281 NGTSVCQRPTCPIL---ECAPEFQEPDGCCPRCAVAEVRSECSLDGIVYQ-NNETWDMGPC-RSC 340
            .|   ||.....:|   :|.|    .||.|          .|.::|..:: ..|.|....| :.|
  Rat  1564 EG---CQCDLGFVLSADQCVP----LDGGC----------GCWVNGTYHEAGTEFWTDTTCSKRC 1611

  Fly   341 RCN-GGTIRCAQMRCPAVKCRANEELK-QPPGEC-CQRCVETAGTCTVFGDPHFRTFDGKFFSFQ 402
            .|. ||.    .:.|.:..|...||.. .|.||. ||  ..:...|.:.|||.:.|.||..|.||
  Rat  1612 HCGPGGD----SLICKSASCGLGEECALLPSGEIGCQ--PTSIAECQILGDPRYITLDGHRFDFQ 1670

  Fly   403 GSCKYLLASDCMG-----KTFHIRLTNEGRGTRRASWAKTVTLSLRNLKVNLGQR--MRVKVNGT 460
            |:|:|||::.|..     :.|::.:.||.||::..|:.::|||.:..|.:.|..:  .:::|:|.
  Rat  1671 GTCEYLLSAPCHAPPPGIEYFNVTVANEHRGSQAVSYTRSVTLHIYGLSLTLSTQWPRQLQVDGE 1735

  Fly   461 RVTLPYFVVAGGQNVTIERLANGGAVMLRSEMGLTLEWNGAGFLQVSVPAKFKKRLCGLCGNFNG 525
            .||||:.:    |::.:..| :|..:::.:..||:|.::|..|:::.|||.:...|||||||:|.
  Rat  1736 MVTLPFQL----QSLLLVHL-SGTGLIVHTTWGLSLVFDGDNFVRLRVPAAYAGTLCGLCGNYNK 1795

  Fly   526 SSRDDLTGKDGRSHGDDEVWHFANSWKVGGPKSCSRKREFLAATPTCDKRKSNF----------- 579
            :|.||||..||:..|          |||||...|.:.:......|...:::.:|           
  Rat  1796 NSSDDLTAVDGKPEG----------WKVGGAPDCDQCQLRPCPKPCTPEQQKHFDGPNACGIITA 1850

  Fly   580 ------YCHPLSVPALFGECNERLNPENYKAACRMDVCEC---PSGDCHCDSFAAYAHECRRLGV 635
                  .||.|..|.||.|            ||.:|.|:.   |.|  .|.:.|.|...|:....
  Rat  1851 PKGPLAPCHSLVPPTLFFE------------ACLLDACQVQGHPGG--LCPAIATYVIACQDAKA 1901

  Fly   636 QLPDWRSATNCPAGWRRNATLSSFKGNQFYGD------PSFSRMKG 675
            ||.:||....||      ....:....|..||      ||.|..||
  Rat  1902 QLGEWRKPDFCP------LQCPAHSHYQLCGDSCPVSCPSLSAPKG 1941

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cv-2NP_524809.2 VWC 184..243 CDD:214564 18/93 (19%)
VWC 256..310 CDD:278520 14/56 (25%)
VWC 319..376 CDD:214564 18/61 (30%)
VWD 371..536 CDD:214566 60/172 (35%)
C8 580..646 CDD:285899 21/68 (31%)
Fcgbpl1NP_001158128.1 VWD 56..212 CDD:278521
C8 252..326 CDD:214843
TIL 329..383 CDD:280072
VWD 448..598 CDD:278521
C8 644..714 CDD:285899
TIL 718..771 CDD:280072
VWC 773..827 CDD:302663
VWD 831..988 CDD:214566
C8 1033..1108 CDD:214843
TIL 1111..1164 CDD:280072
VWC 1166..1218 CDD:302663
VWD 1252..1411 CDD:278521
C8 1450..1525 CDD:214843 14/74 (19%)
TIL 1529..1583 CDD:280072 18/79 (23%)
VWD 1651..1807 CDD:278521 58/160 (36%)
C8 1838..1913 CDD:214843 22/88 (25%)
TIL 1916..1969 CDD:280072 8/26 (31%)
VWC 1974..2025 CDD:302663
VWD 2037..2178 CDD:214566
C8 2220..2294 CDD:214843
TIL 2297..2350 CDD:280072
VWC 2355..2404 CDD:302663
VWD 2404..2558 CDD:295339
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1216
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.