DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cv-2 and Vwf

DIOPT Version :10

Sequence 1:NP_524809.2 Gene:cv-2 / 45280 FlyBaseID:FBgn0000395 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_035838.3 Gene:Vwf / 22371 MGIID:98941 Length:2813 Species:Mus musculus


Alignment Length:570 Identity:156/570 - (27%)
Similarity:224/570 - (39%) Gaps:141/570 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 ESGSEWNDPEDPCKTYKCVATVVTETIQKCYSQCDNNQLQPPRPGECCPTCQG---------CKI 186
            :.|:..:||.|...::     .::...|:|      .:..|  |...|.:..|         |::
Mouse   176 QEGTLTSDPYDFANSW-----ALSSEEQRC------KRASP--PSRNCESSSGDMHQAMWEQCQL 227

  Fly   187 --NGQTVAEGHEVDASIDDRCLVCQCRGTQLTCSKKTCPVLPCPMSKQIKRPDECCPRCPQNHSF 249
              .....|..|.:   :|....|..|.....||:  |.|...||:..:..|      .|.|.   
Mouse   228 LKTASVFARCHPL---VDPESFVALCEKILCTCA--TGPECACPVLLEYAR------TCAQE--- 278

  Fly   250 LPVPGKCLFNKSVYPEKTQFMPDRCTNCTCLNGTSVCQRPTCPILECAPEFQEPDGCCPR-C--- 310
                |..|:..:.:                    |.| ||.||   ...|::|....||| |   
Mouse   279 ----GMVLYGWTDH--------------------SAC-RPACP---AGMEYKECVSPCPRTCQSL 315

  Fly   311 AVAEVRSECSLDGIVYQNNETWDMGPCRSCRCNGGTI----RCAQMR-CPAVKCRANEELKQPPG 370
            ::.||..:..:||                |.|..|.:    ||.|.. ||.|    :...:.|||
Mouse   316 SINEVCQQQCVDG----------------CSCPEGELLDEDRCVQSSDCPCV----HAGKRYPPG 360

  Fly   371 ----ECCQRCV-----------ETAGTCTVFGDPHFRTFDGKFFSFQGSCKYLLASDCMGKTFHI 420
                :.|..|:           |..|.|.|.|..||::||.::|:|.|.|:||||.||...||.|
Mouse   361 TSLSQDCNTCICRNSLWICSNEECPGECLVTGQSHFKSFDNRYFTFSGICQYLLARDCEDHTFSI 425

  Fly   421 RLTN-------EGRGTRRASWAKTVTLS-LRNLKVNLGQRMRVKVNGTRVTLPYFVVAGGQNVTI 477
            .:..       :...||..|    |.|| |.|..|.|.....|.::|..|.||:  :.|...:..
Mouse   426 VIETMQCADDPDAVCTRSVS----VRLSALHNSLVKLKHGGAVGIDGQDVQLPF--LQGDLRIQH 484

  Fly   478 ERLANGGAVMLRSEMGLTLEWNGAGFLQVSVPAKFKKRLCGLCGNFNGSSRDDLTGKDGRSHGDD 542
            ..:|   :|.|.....|.::|:|.|.|.|.:...:..:.||||||:||:..||.....|..  :.
Mouse   485 TVMA---SVRLSYAEDLQMDWDGRGRLLVKLSPVYSGKTCGLCGNYNGNKGDDFLTPAGLV--EP 544

  Fly   543 EVWHFANSWKVGGPKSCSRKREFLAATPTCDKRKSNF---YCHPLSVPALFGECNERLNPENYKA 604
            .|..|.|:||:.|  .||..|...:...:.:.|.:.|   .| .|...:.|..|:..::|..|..
Mouse   545 LVVDFGNAWKLQG--DCSDLRRQHSDPCSLNPRLTRFAEEAC-ALLTSSKFEACHHAVSPLPYLQ 606

  Fly   605 ACRMDVCEC-PSGDCHCDSFAAYAHECRRLGVQLPDWRS----ATNCPAG 649
            .||.|||.| .|.||.|::.|.||.||.|.||.: .||.    |..||.|
Mouse   607 NCRYDVCSCSDSRDCLCNAVANYAAECARKGVHI-GWREPGFCALGCPQG 655

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cv-2NP_524809.2 VWC 184..243 CDD:214564 13/60 (22%)
VWC 256..310 CDD:278520 12/54 (22%)
VWC 319..376 CDD:214564 15/65 (23%)
VWD 371..536 CDD:214566 59/183 (32%)
C8 580..646 CDD:462584 27/70 (39%)
VwfNP_035838.3 VWD 35..179 CDD:459671 0/2 (0%)
C8 218..292 CDD:214843 19/112 (17%)
TIL 295..348 CDD:410995 18/71 (25%)
VWC 350..>394 CDD:450195 11/47 (23%)
VWD 388..541 CDD:459671 55/161 (34%)
C8 579..649 CDD:214843 27/71 (38%)
TIL 652..707 CDD:410995 3/4 (75%)
Amino-terminal 764..787
E1 788..833
TIL <788..827 CDD:410995
CX 826..853
VWD 856..1011 CDD:214566
C8 1053..1127 CDD:214843
TIL 1146..1196 CDD:410995
VWA_N2 1198..1276 CDD:465038
VWA 1277..1449 CDD:214621
VWA 1498..1658 CDD:459670
VWA 1691..1863 CDD:459670
VWD 1950..2102 CDD:459671
C8 2138..2199 CDD:462584
TIL 2203..2254 CDD:410995
E2 2216..2261
VWC 2257..2321 CDD:214564
VWC 2431..2494 CDD:214564
Cell attachment site. /evidence=ECO:0000250 2507..2509
VWC 2582..2644 CDD:450195
CT 2727..2808 CDD:214482
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.