DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cv-2 and Tecta

DIOPT Version :9

Sequence 1:NP_524809.2 Gene:cv-2 / 45280 FlyBaseID:FBgn0000395 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_001365531.1 Gene:Tecta / 21683 MGIID:109575 Length:2155 Species:Mus musculus


Alignment Length:913 Identity:177/913 - (19%)
Similarity:286/913 - (31%) Gaps:319/913 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 CCQSSGQWKFPAQQPRKSLASRRRHTGFRPSTQLLILIA----VLLALLQGRTVDAGAGDSLSGV 62
            |...|...||...:.|..:.:...::.|.....::.:.|    .|..|.|....::...||::..
Mouse   896 CNNDSELLKFYRSRSRCGIINDPSNSSFLECHGVVNVTAYYRTCLFRLCQSGGNESELCDSVARY 960

  Fly    63 RQSCSNEGEEV--------------QLKNQPQIFTCFK------------------CECQNGFVN 95
            ..:|.|...||              :..:..:..||.:                  |:|..|:..
Mouse   961 ASACKNADVEVGPWRTYDFCPLECPENSHFEECMTCTETCETLALGPICVDSCSEGCQCDEGYAL 1025

  Fly    96 CRDTCPPVNDCYILDKSNGTCCRRCKGCSFRGMSYESGSE-WNDPEDPCKTY-KCVAT---VVTE 155
            ....|.|.::|               ||:|.|....:... |.|.:  |:.: .|..|   |..|
Mouse  1026 QGSQCVPRSEC---------------GCNFEGHQLATNETFWVDQD--CQIFCYCNGTDNSVHCE 1073

  Fly   156 TI-----QKCYSQCDNNQLQPPRPGEC---------------------CPTCQGCKINGQTVAEG 194
            ||     :.|..:......||.....|                     ||... |....:.:::.
Mouse  1074 TIPCRDDEYCMEESGLYYCQPRTDASCIVSGYGHYLTFDGYPFDFQTSCPLIL-CTTGSRPISDS 1137

  Fly   195 HE---VDASIDDR-----------------------------CLVCQCR---------------- 211
            ..   |.|..:||                             .||...|                
Mouse  1138 FPKFIVTAKNEDRDPSLALWVKQVDVNVFGYSIVIHRAYKHTVLVNNERLYLPLKLGQGKINIFS 1202

  Fly   212 -----------GTQLTCSKKTCPVLPCPMSKQ--------------------------------- 232
                       |.::....||...:..|.|.|                                 
Mouse  1203 FGFHVVVETDFGLKVVYDWKTFLSITVPRSMQNGTYGLCGRYNGNPDDDLEMPMGLPALSINEFG 1267

  Fly   233 ---IKRPDEC-------CPRCPQNHSFLPVPGKCLFNKSVYPEKT------------QFMPDRCT 275
               :||...|       ||.|.:...|..|...|    |:.|.:.            .|....|.
Mouse  1268 QSWVKRDTFCQVGCGDRCPSCAKVEGFSKVQQLC----SLIPNQNAGFAKCHSKVNPTFFYKNCL 1328

  Fly   276 NCTCLNG-------------TSVCQRP---------------TCPILECAPEFQEPDG------- 305
            ..:|::|             .|.||..               |||          |:.       
Mouse  1329 FDSCIDGGAVQTACSWLQNYASTCQTQGIAVTGWRNYTSCSVTCP----------PNSHYESCVS 1383

  Fly   306 -CCPRCAVAEVRSECS-----------------------------LDGIVYQNNETWDMGPC-RS 339
             |.||||...::|:|:                             .||..|:..:.:..|.| |.
Mouse  1384 VCQPRCAAIRLKSDCNHYCVEGCQCDAGYVLNGKSCILPHNCGCYSDGKYYEPKQLFWNGDCTRR 1448

  Fly   340 CRCNGGTIRCAQMRCPAVKCRANEELKQPPGECCQR-----CVET-AGTCTVFGDPHFRTFDGKF 398
            |||    .|...::|...:|:::|       ||..|     |..| ...|...|...||||||.|
Mouse  1449 CRC----FRRNLIQCDPRQCKSDE-------ECALRSGVRGCFSTKTSYCLAAGGGVFRTFDGAF 1502

  Fly   399 FSFQGSCKYLLASDCM---GKTFHIRLTNEGRGTRRASWAKTVTLSLRNLKVNLGQRMRVKVNGT 460
            ..|..:|.::|::.|.   ..:|.:.:..:...:...:....|...:...::.:..|..||||||
Mouse  1503 LRFPANCAFVLSTICQKLPDISFQLIINFDKWSSPNLTIISPVYFYINEEQILINDRNTVKVNGT 1567

  Fly   461 RVTLPYFVVAGGQNVTIERLANGGAVMLRSEMGLTLEWNGAGFLQVSVPAKFKKRLCGLCGNFNG 525
            :|.:|:..     .:..:..::.|.:::.:...:.:.:||...:::|:..:.:.::|||||||||
Mouse  1568 QVNVPFIT-----GLATKIYSSEGFLVIDTSPDIQIYYNGFNVIKISISERLQNKVCGLCGNFNG 1627

  Fly   526 SSRDDLTGKDGRSHGDDEVWHFANSWKVGGPK------SCSRKREFLAATPTCDK-----RKSNF 579
            ...||.....|:......|  .|.|||..|.:      ||: :.:|.....|||.     .:.:.
Mouse  1628 DMTDDYVTLRGKPVVSSVV--LAQSWKTNGMQKRPLAPSCN-ELQFSQYAATCDNVHIQAMQGDG 1689

  Fly   580 YCHPLS-VPALFGECNERLNPENYKAACRMDVCECPSGDCHCDSFAAYAHECRRLGVQLPDWRSA 643
            ||..|: :...|..|...|:|..:..:|.:|.|........|.|.|||...||..|:...:|...
Mouse  1690 YCLKLTDMKGFFQPCYGLLDPLPFYESCYLDGCYNHKKFQLCGSLAAYGEACRSFGILSTEWIEK 1754

  Fly   644 TNC 646
            .||
Mouse  1755 ENC 1757

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cv-2NP_524809.2 VWC 184..243 CDD:214564 19/160 (12%)
VWC 256..310 CDD:278520 16/101 (16%)
VWC 319..376 CDD:214564 17/91 (19%)
VWD 371..536 CDD:214566 44/173 (25%)
C8 580..646 CDD:285899 19/66 (29%)
TectaNP_001365531.1 NIDO 98..254 CDD:214712
VWD 322..478 CDD:395046
C8 517..591 CDD:214843
TIL 597..650 CDD:410995
VWC 652..706 CDD:327433
VWD 703..865 CDD:214566
C8 905..981 CDD:214843 13/75 (17%)
TIL 984..1036 CDD:410995 7/51 (14%)
VWD 1100..1258 CDD:395046 17/158 (11%)
C8 1300..1368 CDD:400886 10/71 (14%)
TIL 1372..1425 CDD:410995 10/62 (16%)
VWD 1487..1639 CDD:395046 39/156 (25%)
C8 1685..1757 CDD:214843 19/71 (27%)
ZP 1805..2059 CDD:214579
FXa_inhibition 2089..2121 CDD:405372
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1216
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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