DRSC/TRiP Functional Genomics Resources

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Protein Alignment cv-2 and Otog

DIOPT Version :10

Sequence 1:NP_524809.2 Gene:cv-2 / 45280 FlyBaseID:FBgn0000395 Length:751 Species:Drosophila melanogaster
Sequence 2:XP_017177514.1 Gene:Otog / 18419 MGIID:1202064 Length:2917 Species:Mus musculus


Alignment Length:682 Identity:169/682 - (24%)
Similarity:245/682 - (35%) Gaps:205/682 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 LSGVRQSC-----SNEGEEVQLKNQPQIFTCFKCECQNGFVNCRD------TCPPVNDCYI---- 108
            |||.|:.|     ::.|..|||   ||:....:.:...|:|..|.      ....::..||    
Mouse   207 LSGEREICLAKEVTHGGVRVQL---PQVVGGVQLQQLAGYVIARHPSAFTLAWDGISAIYIKMSP 268

  Fly   109 --LDKSNGTCCRRCKGCSFRGMSYESGSEWNDPEDPCKT-YKCVATVVTETIQKCYSQCDNNQLQ 170
              |..::|.|                |:...||:|...| |..|...|.|.:.....|..|:...
Mouse   269 EFLGWTHGLC----------------GNNNADPQDDLVTSYGKVTDDVGEFVHSWQEQVPNSPPG 317

  Fly   171 P-----PRPGECCPTCQGCKINGQTVAEGHEVDASIDDRCLVCQCRGTQLTCSKKTCPVLPCPMS 230
            |     |||    |..|....:.|.|.|                           .|.||     
Mouse   318 PVTTSLPRP----PCLQQSPASMQGVYE---------------------------RCEVL----- 346

  Fly   231 KQIKRPDECCPRCPQNHSFL-PVPGKCLFNKSVYPEKTQFMPDRCTNCTCL-NGTSVCQRPTCPI 293
              ::.|.:.|      |::: |:|    |..|...:..|...|..|.|..| .....|.:...|:
Mouse   347 --LRPPFDTC------HAYVSPLP----FAASCTSDLCQSGGDEATWCRALMEYARACAQAGRPL 399

  Fly   294 -----------LECAPE---FQEPDGCCPRCAVAEVRSEC------SLDGIVYQNNETWDMGPCR 338
                       :.|..:   :.|...|||  |..:.|:.|      .:||....|...::.|.|.
Mouse   400 QGWRTQLSQCTVHCKEKAFIYNECIACCP--ASCQSRASCVDSEITCVDGCYCPNGLIFEDGGCM 462

  Fly   339 SCRCNGGTIRCAQMRCPAVKCRANEELKQPPG----ECCQRCVETAG-----------TCTVFGD 388
            |           ...||   |..:..| .|||    |.|..|..|||           .|:|.||
Mouse   463 S-----------PAECP---CEFHGTL-HPPGSVVTEDCNACTCTAGKWVCSSSVCPAECSVTGD 512

  Fly   389 PHFRTFDGKFFSFQGSCKYLLASDCMGKTFHIRLTNEGRGTRRASWAKTVTLSLRNLKVNLGQRM 453
            .||.||||:.::|..:|:|:||......||.:.|.|...|..:..      ..::::.|.|.|..
Mouse   513 IHFTTFDGRRYTFPATCQYILAKSRSSGTFTVTLQNAPCGLNQDG------ACVQSVSVILHQDP 571

  Fly   454 RVKVNGT-----------RVTLPY----FVVAGGQNVTIERLANGGAVMLRSEMGLTLEWNGAGF 503
            |.:|..|           ::|.||    |.:....:|.:....|.|..:|....||.|      :
Mouse   572 RRQVTLTQAGDVLLFDQYKITPPYSDDAFEIRRLSSVFLRVRTNVGVRILYDREGLRL------Y 630

  Fly   504 LQVSVPAKFKKRLCGLCGNFNGSSRDDLTGKDGRSHGDDEVWHFANSWKVGGPKSCSRKREFLAA 568
            |||.  .::.:...||||.|||:::||.....|......::  |.||||.           ..|.
Mouse   631 LQVD--QRWVEDTVGLCGTFNGNTQDDFLSPVGVPESTPQL--FGNSWKT-----------LSAC 680

  Fly   569 TP--------TCD--KRKSNFYCHPLSV--PALFGECNERLNPENYKAACRMDVCECPSGDCHCD 621
            .|        .||  .:.:::.....||  ..||..|:..|:|..|...||.|.|.| ...|.|.
Mouse   681 VPLVPGSLLDPCDVHLQAASYALQSCSVLTGELFAPCSAYLSPIPYFEQCRRDACRC-GQPCLCA 744

  Fly   622 SFAAYAHECRRLGVQLPDWRS-----ATNCPA 648
            :.|.||..|||.|:.: |:|:     |.:|.|
Mouse   745 TLAHYARLCRRHGLPV-DFRAHLPACALSCEA 775

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cv-2NP_524809.2 VWC 184..243 CDD:214564 8/58 (14%)
VWC 256..310 CDD:278520 14/68 (21%)
VWC 319..376 CDD:214564 16/66 (24%)
VWD 371..536 CDD:214566 55/190 (29%)
C8 580..646 CDD:462584 25/72 (35%)
OtogXP_017177514.1 VWD 145..295 CDD:459671 25/106 (24%)
C8 342..405 CDD:462584 17/79 (22%)
TIL 419..467 CDD:410995 13/60 (22%)
VWC 469..>504 CDD:450195 11/35 (31%)
VWD 507..662 CDD:459671 49/168 (29%)
C8 706..760 CDD:462584 22/54 (41%)
TIL 773..837 CDD:460351 2/3 (67%)
TIL 877..939 CDD:410995
VWD 970..1124 CDD:214566
C8 1159..1233 CDD:214843
beta-trefoil_ABD_ABFB-like 1238..1389 CDD:483964
PHA03247 <1459..1974 CDD:223021
VWD 2104..2258 CDD:459671
C8 2294..2362 CDD:214843
TIL 2365..2426 CDD:460351
CT 2834..2916 CDD:214482
Blue background indicates that the domain is not in the aligned region.

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