DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cv-2 and Muc2

DIOPT Version :9

Sequence 1:NP_524809.2 Gene:cv-2 / 45280 FlyBaseID:FBgn0000395 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_076055.4 Gene:Muc2 / 17831 MGIID:1339364 Length:4576 Species:Mus musculus


Alignment Length:825 Identity:187/825 - (22%)
Similarity:286/825 - (34%) Gaps:268/825 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 GFRPSTQLLILIAVLLALLQGRTVDAGAGDSLSGVRQSCSN-----------EGEEVQLKNQPQI 81
            |.|...|||.::.:.:      |:|..|...:.|:   |.|           .|..|:....   
Mouse   497 GLRLQIQLLPVMQLFV------TLDQAAQGQVQGL---CGNFNGLESDDFMTSGGMVEATGA--- 549

  Fly    82 FTCFKCECQNGFVN-------CRDTCPPVNDCYILDKSNGTCCRRCKGCSFRGMSYESGSEWNDP 139
                      ||.|       |.|....::|                .||....|......|   
Mouse   550 ----------GFANTWKAQSSCHDKLDWLDD----------------PCSLNIESANYAEHW--- 585

  Fly   140 EDPCKTYK--------C-VATVVTETIQKC-YS--QCDNNQLQPPRPGEC-CPT----CQGCKIN 187
               |...|        | :|...||..::| |.  .|.||:       :| |..    .:.|...
Mouse   586 ---CSLLKRSETPFARCHLAVDPTEYYKRCKYDTCNCQNNE-------DCMCAALSSYARACAAK 640

  Fly   188 GQTVAEGHEVDASIDDRCLVCQCRGTQ-----LTCSKKTCPVLPCPMSKQIK--RPDECCPRCPQ 245
            |..:....|...:.|    |..|..:|     ||..::||..|....|..:|  .|.|.| .|| 
Mouse   641 GVMLWGWRERVCNKD----VHACPSSQIFMYNLTTCQQTCRSLSEGDSHCLKGFAPVEGC-GCP- 699

  Fly   246 NHSFLPVPGKCL-------FNKSVYPEKTQFMPDRCTNCTCLNG----TSV------CQ------ 287
            :|:|:...|:|:       ::..:|.|....:..:...|.|.||    |.|      ||      
Mouse   700 DHTFMDEKGRCVPLAKCSCYHHGLYLEAGDVILRQEERCICRNGRLQCTQVKLIGHTCQYPKILV 764

  Fly   288 -------------RPT-CPIL-------ECAPEFQEPDGC-CP---------RCAVAEVRSECSL 321
                         ||| |..|       ||.      .|| ||         .| |.|.:..|..
Mouse   765 DCNNLTALAVRKPRPTSCQTLVAGYYHTECI------SGCVCPDGLLDDGRGGC-VEEDKCPCIH 822

  Fly   322 DGIVYQNNETWDMGPCRSCRCNGGTIRCAQMRCPAVKCRANEELKQPPGECCQRCVETAGTCTVF 386
            :..:|.:.|:..:....:|.|..|...|.:..|.:                         ||:::
Mouse   823 NKDLYSSGESIKLDCNNTCTCQKGRWECTRYACHS-------------------------TCSIY 862

  Fly   387 GDPHFRTFDGKFFSFQGSCKYLLASDCMGK----TFHIRLTNEGRGTRRASWAKTVTLSLRNLKV 447
            |..|:.|||||.:.|.|.|.|:...|..|:    :|.|...|...||...:.:|.:.:.:...::
Mouse   863 GSGHYITFDGKHYDFDGHCSYVAVQDYCGQNSTGSFSIITENVPCGTTGVTCSKAIKIFIGGTEL 927

  Fly   448 NLGQRMRV---KVNGTRVTLPYFVVAGGQNVTIERLANGGAVMLRSEMGLTLEWNGAGFLQVSVP 509
            .|..:.||   ...|..|  ||.....||.:.:|  |:.|.:::         |:....:.:.:.
Mouse   928 KLVDKHRVVKQLEEGHHV--PYITREVGQYLVVE--ASSGIIVI---------WDKKTTIFIKLD 979

  Fly   510 AKFKKRLCGLCGNFNGSSRDDLTGKDG---RSHGDDEVWHFANSWKVG--------GPKSCS--- 560
            ..:|..:|||||||:..:::|.|.:|.   .|..|     |.||||..        .|..||   
Mouse   980 PSYKGTVCGLCGNFDDQTKNDFTTRDHMVVTSELD-----FGNSWKEASTCPDVSHNPDPCSLNP 1039

  Fly   561 RKREFLAATPTCDKRKSNFYCHPLSVPALFGECNERLNPENYKAACRMDVCECPSG---DCHCDS 622
            .:|.:  |...|...||.          :|..|:.:::|..:..||..|.|.|.:|   ||.|.:
Mouse  1040 HRRSW--AEKQCSIIKSR----------VFKVCHSKVDPTVFYEACVHDSCSCDTGGDCDCFCSA 1092

  Fly   623 FAAYAHECRRLGVQLPDWRSATNC------------------PAGWRRNATLSSFKGNQFYGDPS 669
            .|:||.||.:....: .||:...|                  |.|.|...|..:..|  .:.:.|
Mouse  1093 VASYAQECTKAEACV-FWRTPDLCPIFCDYYNPPDECEWHYEPCGNRSFETCRTLNG--IHSNIS 1154

  Fly   670 FSRMKGRRQKNHQLRLQLQQEQQQRSKQGQK-------GRHKPGG 707
            .|.::|...:..:.| .:..|..::...|.|       .|:.|||
Mouse  1155 VSYLEGCYPRCPEDR-PIYDEDLKKCVTGDKCGCYIEDTRYPPGG 1198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cv-2NP_524809.2 VWC 184..243 CDD:214564 17/65 (26%)
VWC 256..310 CDD:278520 22/107 (21%)
VWC 319..376 CDD:214564 8/56 (14%)
VWD 371..536 CDD:214566 44/171 (26%)
C8 580..646 CDD:285899 19/68 (28%)
Muc2NP_076055.4 VWD 34..183 CDD:395046
C8 223..289 CDD:400886
TIL 293..349 CDD:410995
VWD 389..543 CDD:395046 12/54 (22%)
C8 580..649 CDD:214843 16/81 (20%)
VWD 848..1006 CDD:214566 46/195 (24%)
C8 1044..1116 CDD:214843 23/84 (27%)
Mucin2_WxxW 1300..1382 CDD:404246
Mucin2_WxxW 2877..2965 CDD:404246
PARM <3553..>3644 CDD:407229
VWD 3872..4039 CDD:214566
C8 4089..4151 CDD:400886
VWC 4322..4386 CDD:214564
CT 4474..4553 CDD:214482
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 56 1.000 Domainoid score I10953
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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