DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cv-2 and Y8A9A.2

DIOPT Version :9

Sequence 1:NP_524809.2 Gene:cv-2 / 45280 FlyBaseID:FBgn0000395 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_001364778.1 Gene:Y8A9A.2 / 173723 WormBaseID:WBGene00021171 Length:1358 Species:Caenorhabditis elegans


Alignment Length:880 Identity:165/880 - (18%)
Similarity:227/880 - (25%) Gaps:350/880 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 CCQSSGQW-KFPAQQPRKSLASRRRHTGFRPSTQLLILIAVLLALLQGRTVDAGAGDSLSGVRQS 65
            ||.|.|.| ::.|..|..:.........:|         .|.|.     ..|.||          
 Worm   560 CCPSGGFWSEWTADAPCATTCGSCSQQVYR---------RVCLT-----EADCGA---------- 600

  Fly    66 CSNEGEEVQLKNQPQIFTCF--KCECQNGFVN--------C----RDTCPPVND--CYILD---- 110
            |:  |.:|:::| ..:..|:  ...|..|:..        |    ..|.|..||  |..||    
 Worm   601 CT--GADVKIQN-CNVGVCYFPLDSCCAGYTATVSGTLHICGPQPTTTTPAPNDETCCPLDGIWG 662

  Fly   111 ------KSNGTCCRRCKG-------------CSFRGMSYE--------SGSEWNDP----EDPCK 144
                  ...||.|..|.|             ||..|.:.|        |.|||...    :..|.
 Worm   663 AWGEWSVCTGTTCGNCGGSRTRTRVCASDSFCSCNGDTTESENCRLLSSWSEWTTTGTCNQTACG 727

  Fly   145 TYKCVATVVTETIQK---CY-----SQCDNNQLQPPRPGECC------PTCQGCKINGQTVAEGH 195
            |  |.....|.|..|   |:     ::.|....:|...|..|      .|..|..|.|...|...
 Worm   728 T--CQTLTYTRTCLKTNGCFCMGSATKTDYCSRKPCATGTACCNSLTAQTVDGVSICGPVEAAED 790

  Fly   196 EVDA------------------------SIDDRC----------------LVCQCRGTQLTCSKK 220
            |.|.                        :.:|.|                ..|.|.|:  |..:.
 Worm   791 ETDPVPCTTTTPACCVLGGVWSEWSSGDACNDTCGNCGVTTLSRVCLSQDYNCACSGS--TTKQS 853

  Fly   221 TCPVLPCPMSK----------------QIKRPD------------ECCPRCPQNHSFLPVPGKCL 257
            .|...|||..:                :....|            :|||......|.....|.| 
 Worm   854 ECAPAPCPFPRTSCCGARKKVIVGRTFECSSADDSDAAPSTLCAVDCCPAAGGYWSEWTTGGSC- 917

  Fly   258 FNKSVYPEKTQFMPDRCTNCTCLNGTSVCQRP-TCP------------ILEC------------- 296
                         |..|.:|:.:....||..| |||            |..|             
 Worm   918 -------------PTTCGSCSTVTQKRVCMSPSTCPCQGVSSRSVNCGITVCYFPDDSCCAGYSA 969

  Fly   297 -----------APEFQEP---------DGCCPRCAVAEVRSECSLDGIVYQNNETWDMGP----- 336
                       .|.:..|         |.|||...:.                ..|...|     
 Worm   970 TVSGTQHICGPQPNYTTPYAPYDPTCTDNCCPETGIW----------------SDWTSTPNQCRD 1018

  Fly   337 -CRSCRCNGGTIRCAQMR--CPAVKCRANEELKQPPG---------ECCQRCVETAGTCTVFGDP 389
             |.||.....|..|....  ||   |:....:.:|.|         .||     ...|.||.|:.
 Worm  1019 YCGSCGNQTRTRTCTSDADGCP---CQGPTTITEPCGTGVCYFPRLSCC-----PGYTATVEGNQ 1075

  Fly   390 HFRTFDGKFFSFQGSCKYLLASDCMGKTFHI----RLTNEGRGTRRAS--WAKTVTLS-LRNLKV 447
            |.                     |...|..:    :|...|.....::  |.:.|::| ..:...
 Worm  1076 HI---------------------CGPLTTAVADPDKLNTCGVSCCPSAGIWGEWVSVSGCNDTCG 1119

  Fly   448 NLGQRMRVKVNGTRVTLPYFVVAGGQNVTIERLANGGAVMLRSEMGLTLEWNGAGFLQVSVPAKF 512
            :.||..|.:   ..::|.|.....| |.|...:......:               |.:.|....|
 Worm  1120 SCGQETRKR---KCLSLQYGCACTG-NATDTSVCASSVCL---------------FPRTSCCTGF 1165

  Fly   513 KKRL--------CGLCGNFNGSSRDDLTGKDGRSHGDDEVWHFANSWKVGGPKSCSRKREFLAAT 569
            ||.:        ||........:.:..|..|....|   :|   |.|  |...:||      |..
 Worm  1166 KKMVNITGRTFYCGPLPVVPAFNPEQTTCCDPEKTG---LW---NDW--GAWTTCS------ATC 1216

  Fly   570 PTCDKRKSNFYC--HPLSVPALFGECNERLNPENYKAACRMDVCECPSGDCHCDSFAAYAHECRR 632
            ..|..:..:..|  .|...|.. |:..|       ..:|...|| .....|....|.|..::   
 Worm  1217 GGCGTQTRSRTCASAPYGCPCT-GDLTE-------TQSCAKQVC-TTGAQCCAGKFVATGYD--- 1269

  Fly   633 LGVQLPDWRSATNCPAGWRRNATLSSFKGNQFYGD 667
             |.|.....:...|...|...|||.....|...|:
 Worm  1270 -GAQYCQDNTPEVCTGTWTEWATLEGAVCNDTCGN 1303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cv-2NP_524809.2 VWC 184..243 CDD:214564 19/126 (15%)
VWC 256..310 CDD:278520 18/99 (18%)
VWC 319..376 CDD:214564 14/73 (19%)
VWD 371..536 CDD:214566 30/179 (17%)
C8 580..646 CDD:285899 13/67 (19%)
Y8A9A.2NP_001364778.1 TSP1 1203..1252 CDD:214559 14/67 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1216
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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