DRSC/TRiP Functional Genomics Resources

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Protein Alignment cv-2 and Vwf

DIOPT Version :10

Sequence 1:NP_524809.2 Gene:cv-2 / 45280 FlyBaseID:FBgn0000395 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_446341.1 Gene:Vwf / 116669 RGDID:621759 Length:2812 Species:Rattus norvegicus


Alignment Length:671 Identity:165/671 - (24%)
Similarity:232/671 - (34%) Gaps:235/671 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 SCSNEGEEVQLKNQPQIFTCFKCECQNGFVNCRDTCPPVNDCYILDKSNGTCCRRCKGCSFRGMS 129
            :|:.:|..:..: :|. |....|.....::.|.::|            |.||         |.:|
  Rat   632 ACARKGVHIGWR-EPD-FCALSCPQGQVYLQCGNSC------------NMTC---------RSLS 673

  Fly   130 YESGSEWNDPEDPCKTYKCVATVVTETIQKCYSQCDNNQLQPPRPGECCPTCQ-GCKINGQTVAE 193
            .        |::.|... |        ::.|:  |.....|..| |:|.|..| .|..:|:... 
  Rat   674 L--------PDEECSEV-C--------LEGCF--CPPGLYQDER-GDCVPKAQCPCYHDGELFQ- 717

  Fly   194 GHEVDASI-DDRCLVCQCRGTQLTC-----SKKTCP--VLPCPMSKQIKRPDECCPR-----CPQ 245
                .|.| .|...:|.|....:.|     |....|  ||..|:|.:.||...|.|.     ||.
  Rat   718 ----PADIFSDHHTMCYCEDGFMHCTTSGASGSLLPNIVLSSPLSHRSKRSLSCRPPMVKLVCPA 778

  Fly   246 NHSFLPVPGKCLFNKSVYPEKTQFMPDRCTNCTCLNGTSVCQRPTCPILECAPEFQEPD------ 304
            ::                                         |....||||...|..|      
  Rat   779 DN-----------------------------------------PRAQGLECAKTCQNYDLECMSL 802

  Fly   305 ----GC-CP--------RCAVAEVRSECSLDGIVYQNNETWDMGPCRSCRCNGGTIRCAQMRCPA 356
                || ||        ||...| |..|...|..|...:|..:| |.:|.|......|....|.|
  Rat   803 GCVSGCLCPPGMVRHENRCVALE-RCPCFHQGEAYSPGDTVKIG-CNTCVCRDRRWNCTTHVCDA 865

  Fly   357 VKCRANEELKQPPGECCQRCVETAGTCTVFGDPHFRTFDGKFFSFQGSCKYLLASD-CMGK--TF 418
                                     ||:..|..|:.||||..:.|.|.|:|:|..| |.|.  ||
  Rat   866 -------------------------TCSALGMAHYLTFDGLKYLFPGECQYVLVQDYCGGSSGTF 905

  Fly   419 HIRLTNEGRGTRRASWAKTVT-------LSLRNLKVNLGQRMRVKVNGTRVTLPYFVVAGGQNVT 476
            .|.:.|||.........|.||       :.|.|.:||:.:.::.:.:                  
  Rat   906 RILVGNEGCTYPSVKCKKRVTILVDGGEIELFNGEVNVKRPLKDESH------------------ 952

  Fly   477 IERLANGGAVMLRSEMGLTLEWNGAGFLQVSVPAK--FKKRLCGLCGNFNGSSRDDLTGKDGRSH 539
            .|.:.:|..|:|....||::.|:..  |.:||..|  :::.:|||||||:|...:|.|...  ..
  Rat   953 FEMVESGQYVILLLGQGLSVVWDHR--LSISVVLKYTYQEHVCGLCGNFDGIQNNDFTSSS--LQ 1013

  Fly   540 GDDEVWHFANSWKVGGPKSCSRKREFLAATPTC-DKRK-----SNFYCH-------------PLS 585
            .:::...|.|||||               :|.| |.||     |...||             .:.
  Rat  1014 VEEDPIDFGNSWKV---------------SPQCADTRKLSLDVSLAACHNNIMKQTMVDSSCRIL 1063

  Fly   586 VPALFGECNERLNPENYKAACRMDVCECPS-GD--CHCDSFAAYAHECRRLGVQLPDWRSATNCP 647
            ...:|..||..::||.|...|..|.|.|.| ||  |.||:.|||||.|.:.| |:..||..|.||
  Rat  1064 TSDIFQGCNRLVDPEPYLDICIYDTCSCESIGDCSCFCDTIAAYAHVCAQHG-QVVAWRKPTLCP 1127

  Fly   648 AG--------------WRRNA 654
            ..              ||.|:
  Rat  1128 QSCEERNVRENSYECEWRYNS 1148

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cv-2NP_524809.2 VWC 184..243 CDD:214564 18/71 (25%)
VWC 256..310 CDD:278520 11/72 (15%)
VWC 319..376 CDD:214564 11/56 (20%)
VWD 371..536 CDD:214566 50/176 (28%)
C8 580..646 CDD:462584 29/81 (36%)
VwfNP_446341.1 VWD 35..179 CDD:459671
C8 218..292 CDD:214843
TIL 295..348 CDD:410995
VWD 388..541 CDD:459671
C8 579..649 CDD:214843 4/18 (22%)
TIL 652..707 CDD:410995 18/95 (19%)
TIL <788..827 CDD:410995 11/39 (28%)
VWD 856..1011 CDD:214566 53/199 (27%)
C8 1053..1127 CDD:214843 27/74 (36%)
TIL 1146..1196 CDD:410995 1/3 (33%)
VWA_N2 1198..1276 CDD:465038
VWA 1277..1449 CDD:214621
VWA 1498..1658 CDD:459670
VWA 1691..1862 CDD:459670
VWD 1950..2102 CDD:459671
C8 2138..2199 CDD:462584
TIL 2203..2254 CDD:410995
VWC 2257..2321 CDD:214564
VWC 2431..2494 CDD:214564
VWC 2581..2643 CDD:450195
CT 2726..2807 CDD:214482
Blue background indicates that the domain is not in the aligned region.

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