DRSC/TRiP Functional Genomics Resources

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Protein Alignment cv-2 and thbs1a

DIOPT Version :10

Sequence 1:NP_524809.2 Gene:cv-2 / 45280 FlyBaseID:FBgn0000395 Length:751 Species:Drosophila melanogaster
Sequence 2:XP_073784058.1 Gene:thbs1a / 100332237 ZFINID:ZDB-GENE-120402-2 Length:1173 Species:Danio rerio


Alignment Length:504 Identity:113/504 - (22%)
Similarity:149/504 - (29%) Gaps:209/504 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   254 GKCLFNKSVYPEKTQFMPDRCTNCTCLNGTSVCQRPTCPILECAPEFQEPDG-CCPRCAVAEVRS 317
            |.||.|:.||.::.::..|.||:|||.|..:||:..:||::.|| ....|:| |||||...   |
Zfish   318 GVCLHNRIVYQDRDEWTVDSCTHCTCQNSATVCREISCPLMPCA-NATVPEGECCPRCGTL---S 378

  Fly   318 ECSLDGIVYQNNETWDMGPCRSCRCNGGTIRCAQMRCPAVKCRANEELKQPPGECCQR----C-- 376
            :..:||  :.....|.|  | |..|..|.                    |..|..|.|    |  
Zfish   379 DAGIDG--WSPWSEWTM--C-SVSCGRGI--------------------QQRGRSCDRINSNCDG 418

  Fly   377 --VETAGTCTVFGDPHFRTFDGKF--FSFQGSCKYLLASDCMGKTFHIRLTN------------- 424
              |:|....|...|..|:. ||.:  :|...||......   |....|||.|             
Zfish   419 TSVQTRDCYTQECDKRFKQ-DGSWSHWSPWSSCSVSCGD---GVITRIRLCNSPTPQMGGRDCAG 479

  Fly   425 EGRGTRRASWAKTVTLSLRNLKVNLGQRMRVKVNGTRVTLPYF----VVAGGQNVTIERLANGGA 485
            |||.|...                  |:....|||.......:    |..||......||.|..|
Zfish   480 EGRETEPC------------------QQDPCPVNGGWGPWSLWDSCSVSCGGGLQRRHRLCNSPA 526

  Fly   486 VMLRSEMGLTLEWNGAGFLQVSVPAKFKKRLC--------GLCGN--FNGSSRDDLTGKDGRSHG 540
            .          ::.|...:..|..|    |:|        |...|  |:|:..:..  .||    
Zfish   527 P----------KYGGKDCVGDSKAA----RMCNAQTCPVDGCLSNPCFSGAKCNSF--PDG---- 571

  Fly   541 DDEVWHFANSWKVGG---------------------PKSCSRKREFLAATPTCDKRKSNFYCHPL 584
                     ||..|.                     |.:|.    .|.....|:..:..:.|.|.
Zfish   572 ---------SWSCGECPAGYTGDGTHCEDIDECKEVPDACF----VLNGVHQCENTEPGYNCLPC 623

  Fly   585 SVPALFGE----------------CNERLNP-------ENYKAAC--------RMDVCEC----- 613
            . |...|:                |..| ||       .|..|.|        .|..|||     
Zfish   624 P-PRYSGQQPYGRGTEQAIANKQVCTPR-NPCADGSHDCNKNANCIYLGIFSDIMFRCECKPGYA 686

  Fly   614 ---------------PSGDCHCDSFAAYAHECRRLGVQLPDWRSATNCP 647
                           |:.|.||...|.|  .|::           .|||
Zfish   687 GNGHICGEDPDLDGWPNTDLHCVENATY--HCKK-----------DNCP 722

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cv-2NP_524809.2 VWC 184..243 CDD:214564
VWC 256..310 CDD:278520 23/54 (43%)
VWC 319..376 CDD:214564 12/60 (20%)
VWD 371..536 CDD:214566 42/201 (21%)
C8 580..646 CDD:462584 22/116 (19%)
thbs1aXP_073784058.1 None
Blue background indicates that the domain is not in the aligned region.

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