DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cv-2 and LOC100329651

DIOPT Version :10

Sequence 1:NP_524809.2 Gene:cv-2 / 45280 FlyBaseID:FBgn0000395 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_001429788.1 Gene:LOC100329651 / 100329651 -ID:- Length:3015 Species:Danio rerio


Alignment Length:810 Identity:171/810 - (21%)
Similarity:253/810 - (31%) Gaps:334/810 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 GAGDSLSGVRQSCSNEGEEV-------QLKNQPQIF--------------TCFK--CECQNGFVN 95
            |:...:||    |.|...|:       ||::...:|              .|.|  |:|...   
Zfish   541 GSCTPISG----CINTNNELFAEQGCDQLRDPEGLFAECHDYVPVAPFVEACVKRTCQCSRA--- 598

  Fly    96 CRDTCPPVNDCYILDKSNGTCCRRCKGCSFRGMSYESGSEWNDPEDPC--------KTYKC---- 148
                   :.||..:...|     ..|.|..:|::.|......:...||        :|..|    
Zfish   599 -------LQDCLCVSFGN-----YAKACVAQGITVEDWRSGTNCVPPCMGNLMFAYETMACNHTC 651

  Fly   149 --------VATVVTETIQKC----YSQCDNNQLQPPR-------PGECCPTCQGCKINGQTVAEG 194
                    ...|:.:.::.|    .|..||.|...|:       ||...|.       |..|..|
Zfish   652 RSLSAPDPTCAVLDDPVEGCGCASDSHLDNQQTCSPKTLCSCYHPGGVAPP-------GPVVIGG 709

  Fly   195 HEVDASIDDRCLVCQCRGTQLTCSKKTCPVLPCPMSKQIKRPDECCPRCPQNHSFLPV------- 252
            .:           |.|...||.|.:    :..|...|       .|..|.|    :||       
Zfish   710 RQ-----------CLCENGQLRCPR----ICNCTAGK-------ICVDCSQ----IPVNTAHRTC 748

  Fly   253 ---------PGKCLFNKSVYPEKTQFMPDRCTNCTCLNGTSVCQRPTCPILECAPEFQEPDGCCP 308
                     .|.|.                 :.|.|..|.                |::.:|.| 
Zfish   749 GSLTKPVSNDGSCF-----------------SGCYCPGGL----------------FEDHNGGC- 779

  Fly   309 RCAVAEVRSECSLDGIVYQNNETWDMGPCRSCRCNGGTIRCAQMRCPAVKCRANEELKQPPGECC 373
               |......|...|.|::..:: .:..|::|.|.||...|....|                   
Zfish   780 ---VTRDNCTCEFSGRVFETGQS-VLTNCKTCTCRGGEWSCVDEEC------------------- 821

  Fly   374 QRCVETAGTCTVFGDPHFRTFDGKFFSFQGSCKYLLASDCMG------KTFHIRLTNEGRGTRRA 432
                  :|||:|||:..::|||.|::.|.|:|:|.||.|...      ||..:...:|.....||
Zfish   822 ------SGTCSVFGNGQYQTFDSKWYRFDGNCQYTLAKDASSSGSFAIKTESVPCCDESLTCSRA 880

  Fly   433 SWAK---TVTLSLRNLKVNLGQRMRVKVNGTRVTLPYFVVAGGQNVTIERLANGGAVMLR----- 489
            ...:   ||||.|.::||.                             |||..||||:..     
Zfish   881 ISVELLGTVTLILSDMKVT-----------------------------ERLPAGGAVLAEPLYSI 916

  Fly   490 -----------SEMGLTLEWNGAGFLQVSVPAKFKKRLCGLCGNFNGSSRDDLTGKDGRSHGDDE 543
                       .::|:|:.|:....:.:.:..:::.|:.||||||:|...:||.     :....|
Zfish   917 HMVGLYIIISAPKLGITVIWDKHTRVTIQLEHQWRGRVLGLCGNFDGKVTNDLL-----TSSSSE 976

  Fly   544 VW---HFANSWKVGGPKSCSRKREFLAATPTC-DKRKSNFYCHPLSVPA-------------LFG 591
            |:   .|.||||              .|||.| |.....|.|...|..|             .|.
Zfish   977 VFSVLDFGNSWK--------------TATPPCSDVINEVFPCEKHSYCAAWAQRRCMILNSDTFK 1027

  Fly   592 ECNERLNPENYKAACRMDVCECP-SGDC--HCDSFAAYAHECRRLGVQLPDWRSATNCPAGWRRN 653
            :|:.:::||.|..||.::.|.|. .|..  .|.:.||||..|....|.: :||:...||.     
Zfish  1028 DCHLKVDPEPYYQACVLESCSCEFEGKFLGFCTAVAAYAEACSAKDVCV-NWRTPDLCPV----- 1086

  Fly   654 ATLSSFKGNQFYGDPSFSRMKGRRQKNHQLRLQLQQEQQQRSKQGQKGRH-KPGGHNQLDRQGHN 717
                       |.|                         ..::.||...| .|.|  |:...|.|
Zfish  1087 -----------YCD-------------------------YYNEVGQSTWHYNPCG--QVKTCGTN 1113

  Fly   718 GLDKDQLQKEFILKHVPSSFLYPRAPDRTP 747
            .....:|:.           .|||.|:.||
Zfish  1114 NRFTGKLEG-----------CYPRCPEETP 1132

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cv-2NP_524809.2 VWC 184..243 CDD:214564 11/58 (19%)
VWC 256..310 CDD:278520 7/53 (13%)
VWC 319..376 CDD:214564 10/56 (18%)
VWD 371..536 CDD:214566 49/189 (26%)
C8 580..646 CDD:462584 22/81 (27%)
LOC100329651NP_001429788.1 None

Return to query results.
Submit another query.