DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cv-2 and Fcgbp

DIOPT Version :9

Sequence 1:NP_524809.2 Gene:cv-2 / 45280 FlyBaseID:FBgn0000395 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_001158129.3 Gene:Fcgbp / 100303643 RGDID:2313189 Length:2583 Species:Rattus norvegicus


Alignment Length:609 Identity:161/609 - (26%)
Similarity:236/609 - (38%) Gaps:153/609 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 GSEWNDPE-DPCKTYKCVATVVTETIQKCYSQCDNNQLQPPR--------PGECCPTCQGCKING 188
            |..|..|. ||.                |:::|..:....|.        ||.|.|...|   .|
  Rat  1421 GGSWQVPGWDPL----------------CWNECQGSCPTCPEDRVEEYEGPGFCGPLAPG---TG 1466

  Fly   189 QTVAEGHE-------VDASIDDRCL-----------------VCQCRG-------TQLTCSKKTC 222
            ...|..|.       ....:.|.||                 .||..|       ||..|.    
  Rat  1467 GPFASCHSHVPPESFFKGCVLDVCLGGGNKDILCQALAAYAAACQAAGIKIEDWRTQAGCE---- 1527

  Fly   223 PVLPCPMSKQIKRPDECCPRCPQNHSFLPVPGKCLFNKSVYPEKTQFMPDRCTNCTCLNGTSVCQ 287
              :|||.:...   :.|.|||         |..|       |...|..|....:..|:.|....|
  Rat  1528 --IPCPDNSHY---ELCGPRC---------PASC-------PPPAQHTPPTACDGPCVEGCQCDQ 1571

  Fly   288 RPTCPILECAPEFQEPDGCCPRCAVAEVRSECSLDGIVYQ-NNETWDMGPC-RSCRCN-GGTIRC 349
            .......:|.|    .||.|          .|.::|..:: ..|.|....| :.|.|. ||.   
  Rat  1572 GFVLSADQCVP----LDGGC----------GCWVNGTYHEAGTEFWTDTTCSKRCHCGPGGD--- 1619

  Fly   350 AQMRCPAVKCRANEELK-QPPGEC-CQRCVETAGTCTVFGDPHFRTFDGKFFSFQGSCKYLLASD 412
             .:.|.:..|...||.. .|.||. ||  ..:...|..:||||:.|.||..|.|||:|:|||::.
  Rat  1620 -SLICKSASCGLGEECALLPSGEIGCQ--PTSIAECEAWGDPHYTTLDGHRFDFQGTCEYLLSAP 1681

  Fly   413 CMG-----KTFHIRLTNEGRGTRRASWAKTVTLSLRNLKVNLGQR--MRVKVNGTRVTLPYFVVA 470
            |..     :.|::.:.||.||::..|:.::|||.:..|.:.|..:  .:::|||..|.||:.:  
  Rat  1682 CHAPPPGIEYFNVTVANEHRGSQAVSYTRSVTLHIYGLSLTLSAQWPRQLQVNGEFVALPFHL-- 1744

  Fly   471 GGQNVTIERLANGGAVMLRSEMGLTLEWNGAGFLQVSVPAKFKKRLCGLCGNFNGSSRDDLTGKD 535
             .|.:::  ..:|..|::.:..||:|.::|..|:::.|||.:...|||||||:|.:..||||..|
  Rat  1745 -DQKLSV--YISGADVVVNTASGLSLAFDGNSFVRLRVPAAYAGSLCGLCGNYNKNPNDDLTAVD 1806

  Fly   536 GRSHGDDEVWHFANSWKVGGPKSCSRKREFLAATPTCDKRKSNF----YCHPLSVP-ALFGECNE 595
            |:..|          |||||...|.:.:......|...:::..|    .|..::.| .....|:.
  Rat  1807 GKPEG----------WKVGGAPGCDQCQPEPCPQPCTPEQQEPFRGPDACGIITAPEGPLAPCHS 1861

  Fly   596 RLNPENYKAACRMDVCEC---PSGDCHCDSFAAYAHECRRLGVQLPDWRSATNCPAGWRRNATLS 657
            .:.|..|..||.:|.|:.   |.|  .|.:.|.|...|:..|.||.:||....||.....|:.. 
  Rat  1862 LVPPTKYFEACLLDACQVQGHPGG--LCPAIATYVAACQAAGAQLGEWRKPDFCPLQCPANSHY- 1923

  Fly   658 SFKGNQFYGD------PSFSRMKG 675
                 |..||      ||.|..:|
  Rat  1924 -----QLCGDSCPVSCPSLSAPEG 1942

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cv-2NP_524809.2 VWC 184..243 CDD:214564 17/89 (19%)
VWC 256..310 CDD:278520 12/53 (23%)
VWC 319..376 CDD:214564 18/61 (30%)
VWD 371..536 CDD:214566 60/172 (35%)
C8 580..646 CDD:285899 20/69 (29%)
FcgbpNP_001158129.3 VWD 56..210 CDD:395046
C8 251..326 CDD:214843
TIL 329..383 CDD:396409
VWD 448..603 CDD:395046
C8 642..717 CDD:214843
TIL 720..773 CDD:396409
VWC 775..829 CDD:327433
VWD 836..991 CDD:395046
C8 1034..1109 CDD:214843
TIL 1112..1165 CDD:396409
VWC 1167..1219 CDD:327433
VWD 1253..1412 CDD:395046
C8 1451..1526 CDD:214843 16/77 (21%)
TIL 1530..1584 CDD:410995 16/76 (21%)
VWD 1652..1808 CDD:395046 58/160 (36%)
C8 1840..1914 CDD:214843 21/75 (28%)
TIL 1917..1970 CDD:396409 8/32 (25%)
VWD 2024..2180 CDD:214566
C8 2222..2296 CDD:214843
TIL 2299..2352 CDD:396409
VWC 2357..2407 CDD:327433
VWD 2406..2560 CDD:413350
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1216
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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