DRSC/TRiP Functional Genomics Resources

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Protein Alignment cv-2 and Fcgbp

DIOPT Version :10

Sequence 1:NP_524809.2 Gene:cv-2 / 45280 FlyBaseID:FBgn0000395 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_001158129.3 Gene:Fcgbp / 100303643 RGDID:2313189 Length:2583 Species:Rattus norvegicus


Alignment Length:609 Identity:161/609 - (26%)
Similarity:236/609 - (38%) Gaps:153/609 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 GSEWNDPE-DPCKTYKCVATVVTETIQKCYSQCDNNQLQPPR--------PGECCPTCQGCKING 188
            |..|..|. ||.                |:::|..:....|.        ||.|.|...|   .|
  Rat  1421 GGSWQVPGWDPL----------------CWNECQGSCPTCPEDRVEEYEGPGFCGPLAPG---TG 1466

  Fly   189 QTVAEGHE-------VDASIDDRCL-----------------VCQCRG-------TQLTCSKKTC 222
            ...|..|.       ....:.|.||                 .||..|       ||..|.    
  Rat  1467 GPFASCHSHVPPESFFKGCVLDVCLGGGNKDILCQALAAYAAACQAAGIKIEDWRTQAGCE---- 1527

  Fly   223 PVLPCPMSKQIKRPDECCPRCPQNHSFLPVPGKCLFNKSVYPEKTQFMPDRCTNCTCLNGTSVCQ 287
              :|||.:...   :.|.|||         |..|       |...|..|....:..|:.|....|
  Rat  1528 --IPCPDNSHY---ELCGPRC---------PASC-------PPPAQHTPPTACDGPCVEGCQCDQ 1571

  Fly   288 RPTCPILECAPEFQEPDGCCPRCAVAEVRSECSLDGIVYQ-NNETWDMGPC-RSCRCN-GGTIRC 349
            .......:|.|    .||.|          .|.::|..:: ..|.|....| :.|.|. ||.   
  Rat  1572 GFVLSADQCVP----LDGGC----------GCWVNGTYHEAGTEFWTDTTCSKRCHCGPGGD--- 1619

  Fly   350 AQMRCPAVKCRANEELK-QPPGEC-CQRCVETAGTCTVFGDPHFRTFDGKFFSFQGSCKYLLASD 412
             .:.|.:..|...||.. .|.||. ||  ..:...|..:||||:.|.||..|.|||:|:|||::.
  Rat  1620 -SLICKSASCGLGEECALLPSGEIGCQ--PTSIAECEAWGDPHYTTLDGHRFDFQGTCEYLLSAP 1681

  Fly   413 CMG-----KTFHIRLTNEGRGTRRASWAKTVTLSLRNLKVNLGQR--MRVKVNGTRVTLPYFVVA 470
            |..     :.|::.:.||.||::..|:.::|||.:..|.:.|..:  .:::|||..|.||:.:  
  Rat  1682 CHAPPPGIEYFNVTVANEHRGSQAVSYTRSVTLHIYGLSLTLSAQWPRQLQVNGEFVALPFHL-- 1744

  Fly   471 GGQNVTIERLANGGAVMLRSEMGLTLEWNGAGFLQVSVPAKFKKRLCGLCGNFNGSSRDDLTGKD 535
             .|.:::  ..:|..|::.:..||:|.::|..|:::.|||.:...|||||||:|.:..||||..|
  Rat  1745 -DQKLSV--YISGADVVVNTASGLSLAFDGNSFVRLRVPAAYAGSLCGLCGNYNKNPNDDLTAVD 1806

  Fly   536 GRSHGDDEVWHFANSWKVGGPKSCSRKREFLAATPTCDKRKSNF----YCHPLSVP-ALFGECNE 595
            |:..|          |||||...|.:.:......|...:::..|    .|..::.| .....|:.
  Rat  1807 GKPEG----------WKVGGAPGCDQCQPEPCPQPCTPEQQEPFRGPDACGIITAPEGPLAPCHS 1861

  Fly   596 RLNPENYKAACRMDVCEC---PSGDCHCDSFAAYAHECRRLGVQLPDWRSATNCPAGWRRNATLS 657
            .:.|..|..||.:|.|:.   |.|  .|.:.|.|...|:..|.||.:||....||.....|:.. 
  Rat  1862 LVPPTKYFEACLLDACQVQGHPGG--LCPAIATYVAACQAAGAQLGEWRKPDFCPLQCPANSHY- 1923

  Fly   658 SFKGNQFYGD------PSFSRMKG 675
                 |..||      ||.|..:|
  Rat  1924 -----QLCGDSCPVSCPSLSAPEG 1942

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cv-2NP_524809.2 VWC 184..243 CDD:214564 17/89 (19%)
VWC 256..310 CDD:278520 12/53 (23%)
VWC 319..376 CDD:214564 18/61 (30%)
VWD 371..536 CDD:214566 60/172 (35%)
C8 580..646 CDD:462584 20/69 (29%)
FcgbpNP_001158129.3 VWD 56..210 CDD:459671
C8 251..326 CDD:214843
TIL 329..383 CDD:460351
VWD 448..603 CDD:459671
C8 642..717 CDD:214843
TIL 720..773 CDD:460351
VWC 775..829 CDD:450195
VWD 836..991 CDD:459671
C8 1034..1109 CDD:214843
TIL 1112..1165 CDD:460351
VWC 1167..1219 CDD:450195
VWD 1253..1412 CDD:459671
C8 1451..1526 CDD:214843 16/77 (21%)
TIL 1530..1584 CDD:410995 16/76 (21%)
VWD 1650..1807 CDD:214566 57/161 (35%)
C8 1840..1914 CDD:214843 21/75 (28%)
TIL 1917..1970 CDD:460351 8/32 (25%)
VWD 2024..2180 CDD:214566
C8 2222..2296 CDD:214843
TIL 2299..2352 CDD:460351
VWC 2357..2407 CDD:450195
VWD 2413..2560 CDD:459671
Blue background indicates that the domain is not in the aligned region.

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