DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cv-2 and zanl

DIOPT Version :9

Sequence 1:NP_524809.2 Gene:cv-2 / 45280 FlyBaseID:FBgn0000395 Length:751 Species:Drosophila melanogaster
Sequence 2:NP_001352287.1 Gene:zanl / 100147904 ZFINID:ZDB-GENE-060131-2 Length:4516 Species:Danio rerio


Alignment Length:778 Identity:192/778 - (24%)
Similarity:283/778 - (36%) Gaps:222/778 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 QGRTVDAG----AGDSLSGVRQSCS------NEGEEVQLKNQPQIFTC-FKCECQNGFVNCRDT- 99
            :|...|.|    ||..:......|:      ..|||...|:      | ..|:|...||.|... 
Zfish  2757 EGCVCDPGYILSAGQCVKENTCGCTFNDHYYKPGEEFYTKD------CDLLCKCDPPFVTCNAAD 2815

  Fly   100 CPPVNDCYILD-----------------------------KSNGTC----CRRCKGCSFRGMSYE 131
            |||:..|.:.|                             ...|||    .|.||..:....|.|
Zfish  2816 CPPMEQCGVQDGITGCYPQGSQDCVVSGDPHYNTFDGKFYSYMGTCTYTLARTCKNNTGPWFSIE 2880

  Fly   132 SGSEWNDPEDPCKTYKCVATV--VTETIQKCYSQCDN-----NQLQPPRPGECCP---------- 179
            ..:|...........|...||  :|.|:.|      |     |.|:...|....|          
Zfish  2881 GKNEERGASGVSYLRKLYVTVDGITVTMMK------NKRTLVNGLRVTLPHSPSPLISLSLAGQY 2939

  Fly   180 ----TCQGCKI--NGQTVAEGHEVDASIDDRCLVC------------QCRGTQLTCSK------- 219
                |..|.|:  :|...|:.....:..|..|.:|            :..|||:..||       
Zfish  2940 VILTTPFGLKVQWDGNHYAKISVPSSYYDQMCGLCGDYDGNPNNDFTKPDGTQVDSSKLFGDSWQ 3004

  Fly   220 ------KTC-----PVLPCP--MSKQIKRPDECCPRCPQNHSF---------LPVPGKCLFNKSV 262
                  .||     |..||.  :..::.:|:.|......|..|         ||....|:|:...
Zfish  3005 TKEDEDATCKPDPGPQPPCDPVLEGEVSKPENCGKITDTNGPFRDCIKVVNPLPFFQSCVFDMCH 3069

  Fly   263 YPEKTQFMPDRCTNCT--CLN-GTSVCQ--RPT-CPILECAPE----------------FQEPDG 305
            |....|.:.|:....|  ||: |..|.|  .|. ||:: |.|.                ...|.|
Zfish  3070 YQGLQQVLCDQLQAYTDACLSAGAPVHQWREPDFCPLV-CPPNSHYSICVSSCPETCLGINGPPG 3133

  Fly   306 CCPRCAVAEVRSECSLD-GIVYQNN---------------------ETWDMGPCR-SCRC-NGGT 346
            |..:|.     ..|..| |.:..:|                     |:|.:..|: .|.| .||:
Zfish  3134 CSEKCV-----EGCECDPGFILSDNKCVPVKDCGCVDSSGSYHPVDESWYLEGCKQKCTCEGGGS 3193

  Fly   347 IRCAQMRC-PAVKCRA--NEELKQPPGECCQRCVETAGTCTVFGDPHFRTFDGKFFSFQGSCKYL 408
            |:|....| |...|:.  .:.:.:|.|         :|.|:|.||||:.|||.|...|.|:|.|.
Zfish  3194 IKCYDTSCLPTESCQLQDGDYICKPLG---------SGICSVSGDPHYTTFDDKVHHFMGACSYT 3249

  Fly   409 LASDCMGKT----FHIRLTNEGR-GTRRASWAKTVTLSLRNLKVNLGQRMRVKVNGTRVTLPYFV 468
            |...|...:    |.:...||.| ..::.|:.::|.:.:.|..|.||:..:::|||.:||.|..:
Zfish  3250 LTKPCNETSGMPYFSVETQNEHRDNNKKVSYVRSVIVKVHNTTVILGKGRKIQVNGVQVTAPVTL 3314

  Fly   469 VAGGQNVTIERLANGGAVMLRSEMGLTLEWNGAGFLQVSVPAKFKKRLCGLCGNFNGSSRDDLTG 533
            ..|     |:...:|..|:|.:..||.:.::|.....|::|:.:...||||||||||:..||...
Zfish  3315 SNG-----IKIFMSGKFVVLETNFGLRVRFDGNHHADVTLPSSYNGLLCGLCGNFNGNPNDDNIK 3374

  Fly   534 KDGRSHGDDEVWHFANSWKV----------GGPKSCSRKREFLAATPTCDKRKSNFYCHPLSVP- 587
            .||:.  .|.......||:|          ||...|..|.:..|..||.        |..::.| 
Zfish  3375 LDGKP--TDSTNELGESWQVPDDRPDCTHGGGDIECDDKIQSEAQKPTS--------CGMITDPN 3429

  Fly   588 ALFGECNERLNPENYKAACRMDVCECPSGDCH---CDSFAAYAHECRRLGVQLPDWRSATNCP 647
            .:|..|:..:.|:.|...|..|  :|.:|...   |.:..:||..|.:.||.: :||:.|.||
Zfish  3430 GIFKPCHAVVPPDPYFENCVFD--QCGTGGAAVALCQAIQSYADLCAQAGVPI-NWRNNTFCP 3489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cv-2NP_524809.2 VWC 184..243 CDD:214564 18/92 (20%)
VWC 256..310 CDD:278520 19/75 (25%)
VWC 319..376 CDD:214564 18/83 (22%)
VWD 371..536 CDD:214566 55/169 (33%)
C8 580..646 CDD:285899 19/69 (28%)
zanlNP_001352287.1 MAM 38..197 CDD:99706
MAM 204..362 CDD:99706
TIL 588..639 CDD:307783
VWD 703..855 CDD:306577
C8 892..967 CDD:214843
TIL 970..1022 CDD:307783
VWC 1024..1076 CDD:327433
VWD 1083..1235 CDD:306577
C8 1281..1349 CDD:214843
TIL 1352..1405 CDD:307783
VWC 1407..1460 CDD:327433
TIL 1466..1517 CDD:307783
VWD 1581..1733 CDD:306577
C8 1770..1845 CDD:214843
TIL 1848..1900 CDD:307783
VWC 1902..1954 CDD:327433
VWD 1961..2112 CDD:306577
C8 2159..2227 CDD:214843
TIL 2230..2283 CDD:307783
VWC 2285..2338 CDD:327433
TIL 2344..2395 CDD:307783
VWD 2459..2611 CDD:306577
C8 2648..2723 CDD:214843
TIL 2726..2778 CDD:307783 5/20 (25%)
VWC 2780..2832 CDD:327433 16/57 (28%)
VWD 2839..2991 CDD:306577 28/157 (18%)
C8 3037..3105 CDD:214843 17/67 (25%)
TIL 3108..3161 CDD:307783 10/57 (18%)
VWC 3163..3216 CDD:327433 12/52 (23%)
VWD 3224..3378 CDD:306577 55/158 (35%)
C8 3422..3488 CDD:312319 19/68 (28%)
TIL 3492..3545 CDD:307783
TILa 3547..3602 CDD:315397
VWD 3609..3762 CDD:306577
C8 3805..3874 CDD:214843
TIL 3877..3932 CDD:307783
VWC 3934..3988 CDD:327433
VWD 3996..4150 CDD:306577
C8 4214..4282 CDD:312319
TIL 4286..4340 CDD:307783
EGF_CA 4399..4433 CDD:238011
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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