DRSC/TRiP Functional Genomics Resources

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Protein Alignment cv-2 and chrdl1

DIOPT Version :10

Sequence 1:NP_524809.2 Gene:cv-2 / 45280 FlyBaseID:FBgn0000395 Length:751 Species:Drosophila melanogaster
Sequence 2:XP_031746051.1 Gene:chrdl1 / 100144642 XenbaseID:XB-GENE-484481 Length:386 Species:Xenopus tropicalis


Alignment Length:224 Identity:51/224 - (22%)
Similarity:76/224 - (33%) Gaps:70/224 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   205 CLVCQCR-GTQLTCSKKTCPVLPCPMSKQIKRPDECCPRCP----------------------QN 246
            |:.|.|| |..:.||:..||.|.|  :..:..|..||||||                      ..
 Frog    73 CVNCLCREGGNVLCSRVRCPSLHC--TNPVYIPQLCCPRCPGDGMLSWEHHEPDTYRQPANREAR 135

  Fly   247 HSFLPV----PGKCLFNKSVYPEKTQFMPDRCTNCTCLNGTSVCQRPTCPILECAPEFQEPDGCC 307
            ||:..|    ||.   |:.....:.:|...|       :...|...|           |:..|..
 Frog   136 HSYHRVHDHSPGS---NRQTGNAQHKFSSTR-------SNRGVLSDP-----------QQASGTI 179

  Fly   308 PRCAVAEVRSE---CSLDGIVYQNNETW-------DMGPCRSCRCNGGTIRCAQMRCP-AVKCRA 361
            .:..:......   |..:|..|.:.|:|       .:..|..|.||.....|.::.|| ...|:.
 Frog   180 VQIVINNNHKHGKVCVSNGKTYSHGESWHPTLRVFGVVECVLCTCNFTKQECKKISCPEQYTCKY 244

  Fly   362 NEELKQPPGECCQRCVETAGTCTVFGDPH 390
            .:::   .|:||:.|.|..      .|||
 Frog   245 PQKI---DGKCCKVCPEEV------IDPH 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cv-2NP_524809.2 VWC 184..243 CDD:214564 15/38 (39%)
VWC 256..310 CDD:278520 7/53 (13%)
VWC 319..376 CDD:214564 16/64 (25%)
VWD 371..536 CDD:214566 7/20 (35%)
C8 580..646 CDD:462584
chrdl1XP_031746051.1 VWC 48..110 CDD:214564 15/38 (39%)
Amnionless <73..>192 CDD:464340 30/141 (21%)
VWC 194..256 CDD:450195 16/64 (25%)
CHRDL_1_2_C 268..386 CDD:437380
Blue background indicates that the domain is not in the aligned region.

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