DRSC/TRiP Functional Genomics Resources

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Protein Alignment csw and PTPRR

DIOPT Version :10

Sequence 1:NP_477131.1 Gene:csw / 45278 FlyBaseID:FBgn0000382 Length:945 Species:Drosophila melanogaster
Sequence 2:NP_002840.2 Gene:PTPRR / 5801 HGNCID:9680 Length:657 Species:Homo sapiens


Alignment Length:209 Identity:83/209 - (39%)
Similarity:114/209 - (54%) Gaps:15/209 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   543 KTYIATQGCLLTQQVNTVTDFWNMVWQENTRVIVMTTKEYERGKEKCARYWPDEGRSEQFGHARI 607
            |.:|||||    ..:|||.|||.|||||::.||||.||..|: .|||..|||:  :...:|...:
Human   460 KAFIATQG----PMINTVDDFWQMVWQEDSPVIVMITKLKEK-NEKCVLYWPE--KRGIYGKVEV 517

  Fly   608 QCVSENSTSDYTLREFLVSWRDQPARRIFHYHFQVWPDHGVPADPGCVLNFLQDVNTRQSHLAQA 672
            ..:|.|...:||:|. ||..:....:.:.||.:..||||..|.....:|..:.||  .:..||..
Human   518 LVISVNECDNYTIRN-LVLKQGSHTQHVKHYWYTSWPDHKTPDSAQPLLQLMLDV--EEDRLASQ 579

  Fly   673 GEKPGPICVHCSAGIGRTGTFIVIDMILDQIVRNGLDTEIDIQRTIQMVRSQRSGLVQTEAQYKF 737
            |.  ||:.|||||||||||.||...:...|:...|:   :|....:..:|..|.|:|||..||:|
Human   580 GR--GPVVVHCSAGIGRTGCFIATSIGCQQLKEEGV---VDALSIVCQLRMDRGGMVQTSEQYEF 639

  Fly   738 VYYAVQHYIQTLIA 751
            |::|:..|...|.|
Human   640 VHHALCLYESRLSA 653

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cswNP_477131.1 SH2_C-SH2_SHP_like 211..307 CDD:198185
PTPc-N11_6 352..748 CDD:350392 81/204 (40%)
PTPRRNP_002840.2 R-PTPc-R 417..642 CDD:350459 79/196 (40%)
Blue background indicates that the domain is not in the aligned region.

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