DRSC/TRiP Functional Genomics Resources

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Protein Alignment csw and PTPRN2

DIOPT Version :10

Sequence 1:NP_477131.1 Gene:csw / 45278 FlyBaseID:FBgn0000382 Length:945 Species:Drosophila melanogaster
Sequence 2:NP_001295197.1 Gene:PTPRN2 / 5799 HGNCID:9677 Length:1038 Species:Homo sapiens


Alignment Length:773 Identity:159/773 - (20%)
Similarity:234/773 - (30%) Gaps:350/773 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 KLSSSLGNVVNHKLQEKQVYNNNNINNNNNNTLNNNNAYNNQRNFEYERAIQAHYGSKGRRSEER 73
            |:|:::.||....:::..|.|.:.:...:.                 .:.:|...|||.      
Human   580 KVSANVQNVTTEDVEKATVDNKDKLEETSG-----------------LKILQTGVGSKS------ 621

  Fly    74 ERSGKFKASKGRKAKVTPPTETPEAQEPACK----------------------NCMTHD---ELA 113
                        |.|..||   ...||.:.|                      .|:.|.   .|.
Human   622 ------------KLKFLPP---QAEQEDSTKFIALTLVSLACILGVLLASGLIYCLRHSSQHRLK 671

  Fly   114 QIIKGVA--KGADAQRNRDNRLQRR--RRPLSAQPSAAASASTSTESLHRLTPSPQASYPATPTS 174
            :.:.|:.  .||||........::|  .||.........|..:|..|.....|.|..|..::.:|
Human   672 EKLSGLGGDPGADATAAYQELCRQRMATRPPDRPEGPHTSRISSVSSQFSDGPIPSPSARSSASS 736

  Fly   175 WTATPPQFPAAFGGASCSNSTLSLLATMRVQLHGYTWFHGNLSGKEAEKLILERGKNGSFLVRES 239
            |:..|.|          ||..:|                                          
Human   737 WSEEPVQ----------SNMDIS------------------------------------------ 749

  Fly   240 QSKPGDFVLSVRTDDKVTHVMIRWQDKKYDVGGGESFGTLSELIDHYKRNPMVETCGTVVHLRQP 304
               .|..:||...|                                              ||:  
Human   750 ---TGHMILSYMED----------------------------------------------HLK-- 763

  Fly   305 FNATRITAAGINARVEQLVKGGFWEEFESLQQDSRDTFSRNEGYKQENRLKNRYRNILPYDHTRV 369
             |..|:...              ||...:.|.:...:|   ...::||..|||...:|.|||:||
Human   764 -NKNRLEKE--------------WEALCAYQAEPNSSF---VAQREENVPKNRSLAVLTYDHSRV 810

  Fly   370 KLLDVEHSVAGAEYINANYIRLPTDGDLYNMSSSSESLNSSVPSCPACTAAQTQRNCSNCQLQNK 434
             ||..|:|.:.::||||:.|   .|.|               |..||                  
Human   811 -LLKAENSHSHSDYINASPI---MDHD---------------PRNPA------------------ 838

  Fly   435 TCVQCAVKSAILPYSNCATCSRKSDSLSKHKRSESSASSSPSSGSGSGPGSSGTSGVSSVNGPGT 499
                                                                             
Human   839 ----------------------------------------------------------------- 838

  Fly   500 PTNLTSGTAGCLVGLLKRHSNDSSGAVSISMAEREREREREMFKTYIATQGCLLTQQVNTVTDFW 564
                                                         ||||||.|..    ||.|||
Human   839 ---------------------------------------------YIATQGPLPA----TVADFW 854

  Fly   565 NMVWQENTRVIVMTTKEYERGKEKCARYWPDEGRSEQFGHARIQCVSENS-TSDYTLREF-LVSW 627
            .|||:....||||.|...|.|..:|..|||||| |..:....:..|||:. ..|:.:|.| |.:.
Human   855 QMVWESGCVVIVMLTPLAENGVRQCYHYWPDEG-SNLYHIYEVNLVSEHIWCEDFLVRSFYLKNL 918

  Fly   628 RDQPARRIFHYHFQVWPDHGVPADPGCVLNFLQDVNTRQSHLAQAGEKPGPICVHCSAGIGRTGT 692
            :....|.:..:||..|.|.|||:....:|:|.:.||.     ...| :..||.||||.|.||:||
Human   919 QTNETRTVTQFHFLSWYDRGVPSSSRSLLDFRRKVNK-----CYRG-RSCPIIVHCSDGAGRSGT 977

  Fly   693 FIVIDMILDQIVRNGLDTEIDIQRTIQMVRSQRSGLVQTEAQYKFVYYAVQHYIQTLI 750
            :::|||:|:::.:..  .||||..|::.:|.||.|:|||:.|::|...||...:..::
Human   978 YVLIDMVLNKMAKGA--KEIDIAATLEHLRDQRPGMVQTKEQFEFALTAVAEEVNAIL 1033

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cswNP_477131.1 SH2_C-SH2_SHP_like 211..307 CDD:198185 6/95 (6%)
PTPc-N11_6 352..748 CDD:350392 105/397 (26%)
PTPRN2NP_001295197.1 RESP18 98..>152 CDD:464394
Receptor_IA-2 532..620 CDD:463293 8/56 (14%)
R-PTP-N2 750..1032 CDD:350458 118/507 (23%)
Blue background indicates that the domain is not in the aligned region.

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