DRSC/TRiP Functional Genomics Resources

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Protein Alignment csw and PTPRK

DIOPT Version :10

Sequence 1:NP_477131.1 Gene:csw / 45278 FlyBaseID:FBgn0000382 Length:945 Species:Drosophila melanogaster
Sequence 2:NP_001278910.1 Gene:PTPRK / 5796 HGNCID:9674 Length:1462 Species:Homo sapiens


Alignment Length:562 Identity:147/562 - (26%)
Similarity:210/562 - (37%) Gaps:216/562 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   224 LILERGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRWQDKKY-DVGGGESFGTLS-ELIDHY 286
            ||:::.|    |.::.:...|:      |..::|| |:...|:.| |.....:...|| ..:|.:
Human   773 LIVKKSK----LAKKRKDAMGN------TRQEMTH-MVNAMDRSYADQSTLHAEDPLSITFMDQH 826

  Fly   287 K------RNPMVETCGTVVHLRQPFNAT----------RITAAGINA-----------RVEQLVK 324
            .      .:|:|.|...|....:..:||          |....|..:           ||..|::
Human   827 NFSPRLPNDPLVPTAVLVPITDENHSATAESSRLLDVPRYLCEGTESPYQTGQLHPAIRVADLLQ 891

  Fly   325 G----------GFWEEFESL---QQDSRDTFSRNEGYKQENRLKNRYRNILPYDHTRVKLLDVEH 376
            .          ||.||:||.   |..|.|.     ..|.:||.||||.||:.|||:||.|..||.
Human   892 HINLMKTSDSYGFKEEYESFFEGQSASWDV-----AKKDQNRAKNRYGNIIAYDHSRVILQPVED 951

  Fly   377 SVAGAEYINANYIRLPTDGDLYNMSSSSESLNSSVPSCPACTAAQTQRNCSNCQLQNKTCVQCAV 441
            . ..::|||||||    |..||.                                          
Human   952 D-PSSDYINANYI----DIWLYR------------------------------------------ 969

  Fly   442 KSAILPYSNCATCSRKSDSLSKHKRSESSASSSPSSGSGSGPGSSGTSGVSSVNGPGTPTNLTSG 506
                                                                 :|...|::    
Human   970 -----------------------------------------------------DGYQRPSH---- 977

  Fly   507 TAGCLVGLLKRHSNDSSGAVSISMAEREREREREMFKTYIATQGCLLTQQVNTVTDFWNMVWQEN 571
                                                  ||||||.:    ..||.|||.|:|||.
Human   978 --------------------------------------YIATQGPV----HETVYDFWRMIWQEQ 1000

  Fly   572 TRVIVMTTKEYERGKEKCARYWPDEGRSEQFGHARIQCVSENSTSDYTLREFLVSWRD-QPARRI 635
            :..|||.|...|.|:.||.:||||:  :|.:|..::.||.....::|.:|.|.:..|. ...|.:
Human  1001 SACIVMVTNLVEVGRVKCYKYWPDD--TEVYGDFKVTCVEMEPLAEYVVRTFTLERRGYNEIREV 1063

  Fly   636 FHYHFQVWPDHGVPADPGCVLNFLQDVNTRQSHLAQAGEKPGPICVHCSAGIGRTGTFIVIDMIL 700
            ..:||..|||||||.....:|:|::.|.......|      |||.||||||.||||.:||||::|
Human  1064 KQFHFTGWPDHGVPYHATGLLSFIRRVKLSNPPSA------GPIVVHCSAGAGRTGCYIVIDIML 1122

  Fly   701 DQIVRNGLDTEIDIQRTIQMVRSQRSGLVQTEAQYKFVYYAV 742
            |...|.|:   :||...::.:||:|..:||||.||.|::.|:
Human  1123 DMAEREGV---VDIYNCVKALRSRRINMVQTEEQYIFIHDAI 1161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cswNP_477131.1 SH2_C-SH2_SHP_like 211..307 CDD:198185 19/90 (21%)
PTPc-N11_6 352..748 CDD:350392 111/392 (28%)
PTPRKNP_001278910.1 MAM 32..192 CDD:214533
IG_like 202..288 CDD:214653
Ig strand B 212..216 CDD:409353
Ig strand C 226..232 CDD:409353
Ig strand E 253..257 CDD:409353
Ig strand F 267..272 CDD:409353
fn3 294..371 CDD:394996
fn3 488..583 CDD:394996
PTP_DSP_cys 888..1166 CDD:475123 122/436 (28%)
R-PTPc-K-2 1252..1457 CDD:350484
Blue background indicates that the domain is not in the aligned region.

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