DRSC/TRiP Functional Genomics Resources

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Protein Alignment csw and PTPRC

DIOPT Version :10

Sequence 1:NP_477131.1 Gene:csw / 45278 FlyBaseID:FBgn0000382 Length:945 Species:Drosophila melanogaster
Sequence 2:NP_002829.3 Gene:PTPRC / 5788 HGNCID:9666 Length:1306 Species:Homo sapiens


Alignment Length:933 Identity:192/933 - (20%)
Similarity:305/933 - (32%) Gaps:372/933 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KCLEKLSSSLGNVVNHKLQEKQVYNN-----NNINNNNNNTLNNNNAYNNQRNFEYERAIQAHYG 64
            |.:|..:....|:.........:::|     .|:...:....::...|||.:.....:.|:..:|
Human   326 KNIETFTCDTQNITYRFQCGNMIFDNKEIKLENLEPEHEYKCDSEILYNNHKFTNASKIIKTDFG 390

  Fly    65 SKGR------RSEERERSGKFKASKGRKAKVT--PPTET--------PEAQEPAC----KNCMTH 109
            |.|.      |||           ...:..:|  ||..:        .:..|..|    ||.:.:
Human   391 SPGEPQIIFCRSE-----------AAHQGVITWNPPQRSFHNFTLCYIKETEKDCLNLDKNLIKY 444

  Fly   110 DELAQIIKGVAKG---------ADAQRNRDNRLQRRRRPLSAQPSAAASASTSTESLHRLTPSPQ 165
            |  .|.:|...|.         |..|||                .:||....:|:|         
Human   445 D--LQNLKPYTKYVLSLHAYIIAKVQRN----------------GSAAMCHFTTKS--------- 482

  Fly   166 ASYPATPTS-WTATPPQFPAAFGGASCSNSTLSLLA--TMRVQLH-------GYTWFHGNLSGKE 220
                |.|:. |                 |.|:|:.:  :|.|:..       .:..:|  |..:.
Human   483 ----APPSQVW-----------------NMTVSMTSDNSMHVKCRPPRDRNGPHERYH--LEVEA 524

  Fly   221 AEKLIL-ERGKNGSFLVRESQ--------------SKPGD-FVLSVRTD---------------- 253
            ...|:. |..||..|.|::.|              ..||: |:|...|.                
Human   525 GNTLVRNESHKNCDFRVKDLQYSTDYTFKAYFHNGDYPGEPFILHHSTSYNSKALIAFLAFLIIV 589

  Fly   254 DKVTHVMIRWQDKKYDVGGGES--FGTLSELIDHYKRNPMVETCGTVVHLRQPFNATRITAAGIN 316
            ..:..:::.:  |.||:....|  .....||::......::..        :|.:|..:    :.
Human   590 TSIALLVVLY--KIYDLHKKRSCNLDEQQELVERDDEKQLMNV--------EPIHADIL----LE 640

  Fly   317 ARVEQLVKGG--FWEEFESLQQDSRDTFSR---NEGYKQENRLKNRYRNILPYDHTRVKLLDVEH 376
            ....::...|  |..||:|:.:    .||:   .|..|..|:.||||.:|||||:.||:|.:: :
Human   641 TYKRKIADEGRLFLAEFQSIPR----VFSKFPIKEARKPFNQNKNRYVDILPYDYNRVELSEI-N 700

  Fly   377 SVAGAEYINANYIRLPTDGDLYNMSSSSESLNSSVPSCPACTAAQTQRNCSNCQLQNKTCVQCAV 441
            ..||:.||||:||    ||                                              
Human   701 GDAGSNYINASYI----DG---------------------------------------------- 715

  Fly   442 KSAILPYSNCATCSRKSDSLSKHKRSESSASSSPSSGSGSGPGSSGTSGVSSVNGPGTPTNLTSG 506
                                                                             
Human   716 ----------------------------------------------------------------- 715

  Fly   507 TAGCLVGLLKRHSNDSSGAVSISMAEREREREREMFK---TYIATQGCLLTQQVNTVTDFWNMVW 568
                                               ||   .|||.||    .:..||.|||.|:|
Human   716 -----------------------------------FKEPRKYIAAQG----PRDETVDDFWRMIW 741

  Fly   569 QENTRVIVMTTKEYERGKEKCARYWP--DEGRSEQFGHARIQCVSENSTSDYTLREFLVSWRDQP 631
            ::...||||.|:..|..:.|||.|||  :|| :..||...::........||.:::..:..:.:.
Human   742 EQKATVIVMVTRCEEGNRNKCAEYWPSMEEG-TRAFGDVVVKINQHKRCPDYIIQKLNIVNKKEK 805

  Fly   632 A--RRIFHYHFQVWPDHGVPADPGCVLNFLQDVNTRQSHLAQAGEKPGPICVHCSAGIGRTGTFI 694
            |  |.:.|..|..|||||||.||..:|...:.||...:..:      |||.||||||:|||||:|
Human   806 ATGREVTHIQFTSWPDHGVPEDPHLLLKLRRRVNAFSNFFS------GPIVVHCSAGVGRTGTYI 864

  Fly   695 VIDMILDQIVRNGLDTE--IDIQRTIQMVRSQRSGLVQTEAQYKFVYYAVQHYIQTLIARKRAEE 757
            .||.:|:     ||:.|  :|:...:..:|.||..:||.||||..::.|:..|            
Human   865 GIDAMLE-----GLEAENKVDVYGYVVKLRRQRCLMVQVEAQYILIHQALVEY------------ 912

  Fly   758 QSLQVGREYTNIKYTGEIGNDSQRSPLPPAISSISLVPSKTPLTPTSADLGTGMGLSMGVGMGVG 822
              .|.|....|:            |.|.|.:.::......:..:|..|:..............:|
Human   913 --NQFGETEVNL------------SELHPYLHNMKKRDPPSEPSPLEAEFQRLPSYRSWRTQHIG 963

  Fly   823 NKHASKQQPPLPVVNCNNNNNGI 845
            |:..:|.:        |.|:|.|
Human   964 NQEENKSK--------NRNSNVI 978

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cswNP_477131.1 SH2_C-SH2_SHP_like 211..307 CDD:198185 21/129 (16%)
PTPc-N11_6 352..748 CDD:350392 104/404 (26%)
PTPRCNP_002829.3 PTP_N 7..32 CDD:403599
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 28..163
PHA03255 81..>231 CDD:165513
CD45 237..295 CDD:432641
fn3 393..462 CDD:394996 15/81 (19%)
FN3 485..565 CDD:238020 18/98 (18%)
R-PTPc-C-1 707..907 CDD:350405 87/365 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 993..1014
R-PTP-C-2 1017..1223 CDD:350406
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1261..1306
Blue background indicates that the domain is not in the aligned region.

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