DRSC/TRiP Functional Genomics Resources

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Protein Alignment csw and ptpn2b

DIOPT Version :10

Sequence 1:NP_477131.1 Gene:csw / 45278 FlyBaseID:FBgn0000382 Length:945 Species:Drosophila melanogaster
Sequence 2:NP_997819.1 Gene:ptpn2b / 561613 ZFINID:ZDB-GENE-030909-8 Length:393 Species:Danio rerio


Alignment Length:474 Identity:119/474 - (25%)
Similarity:177/474 - (37%) Gaps:182/474 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   329 EEFESLQQDSR--DTF--SRNEGYK--------QENRLKNRYRNILPYDHTRVKLLDVEHSVAGA 381
            :|||.:..:.|  :.:  .||:.::        .|||::||||::.|:||:||||.:.|:     
Zfish     3 QEFEDIDSEGRWQNIYLEIRNQSHECAFKVAKYPENRIRNRYRDVSPFDHSRVKLENTEN----- 62

  Fly   382 EYINANYIRLPTDGDLYNMSSSSESLNSSVPSCPACTAAQTQRNCSNCQLQNKTCVQCAVKSAIL 446
            :||||:.                                                          
Zfish    63 DYINASL---------------------------------------------------------- 69

  Fly   447 PYSNCATCSRKSDSLSKHKRSESSASSSPSSGSGSGPGSSGTSGVSSVNGPGTPTNLTSGTAGCL 511
                                                                             
Zfish    70 ----------------------------------------------------------------- 69

  Fly   512 VGLLKRHSNDSSGAVSISMAEREREREREMFKTYIATQGCLLTQQVNTVTDFWNMVWQENTRVIV 576
                            :.|.|.:|.        ||.|||.|.    ||...||.|:|::.|:.::
Zfish    70 ----------------VVMEEAQRR--------YILTQGPLR----NTCGHFWLMIWEQKTKAVI 106

  Fly   577 MTTKEYERGKEKCARYWP-DEGRSEQFGHAR--IQCVSENSTSDYTLREF-LVSWRDQPARRIFH 637
            |..:..|:|.||||:||| .|.|...|...|  :..|||:..|.||.|.. |.:......|.|:|
Zfish   107 MLNRVIEKGSEKCAQYWPTQEEREMSFRDTRFVVTLVSEDVKSYYTTRVLELQNANTGETREIYH 171

  Fly   638 YHFQVWPDHGVPADPGCVLNFLQDVNTRQSHLAQAGEKPGPICVHCSAGIGRTGTFIVIDMILDQ 702
            :|:..|||.|||..|...||||..|  |:|  ...|.:.||..|||||||||:|||.::|..|..
Zfish   172 FHYTTWPDFGVPESPASFLNFLFKV--RES--GSLGMEQGPAVVHCSAGIGRSGTFSLVDTCLVL 232

  Fly   703 IVRNGLDTEIDIQRTIQMVRSQRSGLVQTEAQYKFVYYAVQHYIQTLIARKRAEEQSLQVGREYT 767
            :.:......:||::.:..:|..|.||:||..|.:|.|.||....:.::.....::|..::.||  
Zfish   233 MDKRKDPLLVDIKKILLDMRKYRMGLIQTPDQLRFSYMAVLEGAKYIMGDSSVQKQWRELSRE-- 295

  Fly   768 NIKYTGEIGNDSQRSPLPP 786
                ..|..::|...|.||
Zfish   296 ----DQEPLSESPPPPQPP 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cswNP_477131.1 SH2_C-SH2_SHP_like 211..307 CDD:198185
PTPc-N11_6 352..748 CDD:350392 104/399 (26%)
ptpn2bNP_997819.1 PTP_DSP_cys 15..272 CDD:475123 105/416 (25%)
Blue background indicates that the domain is not in the aligned region.

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