DRSC/TRiP Functional Genomics Resources

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Protein Alignment csw and ptprz1a

DIOPT Version :10

Sequence 1:NP_477131.1 Gene:csw / 45278 FlyBaseID:FBgn0000382 Length:945 Species:Drosophila melanogaster
Sequence 2:XP_005163194.2 Gene:ptprz1a / 497461 ZFINID:ZDB-GENE-090406-1 Length:1827 Species:Danio rerio


Alignment Length:884 Identity:194/884 - (21%)
Similarity:297/884 - (33%) Gaps:353/884 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 LAQIIKGVAKGADAQRNRDNRLQRRRRPLSAQPSAAASASTSTESLH-RLTPSPQASYPATPTSW 175
            :|..:..:|:.|..|            .|.|.....:||.|.|..|. |.||:|.......|||.
Zfish   918 VAATVNNIAQSAIGQ------------SLGASAPIRSSAITPTPILELRSTPTPVVPPTIAPTSP 970

  Fly   176 T--------ATPPQFPAAFGGASCSNSTLSLLATMRVQLHGYT----WFHGNLSGKEA------- 221
            :        ..||..|.:....|.|..|.|..........|:|    |...:.||.|:       
Zfish   971 SDSITVVAPVVPPTIPVSSAPESSSMPTHSADGQQENSASGWTFDLDWGQSSASGDESIAAPYIT 1035

  Fly   222 -------------------EKLILERGKNG----------------SFLVR---ESQSKPG---- 244
                               .......|:||                |:.:|   |.:|..|    
Zfish  1036 TASPTEVSPEETDDGNEEHSSSFYFEGENGTESEVTDFRVTLQPSPSWTLRGSGEEESGSGETLT 1100

  Fly   245 ------DFVLSVRTDDKVTHVMIRWQDKKYDVGGG--ESFGTLSELIDHYKRN----PMVET--- 294
                  ||.:..||:.:..      ::...|....  ||...|:..|:..|:.    .:|.|   
Zfish  1101 DNETSSDFSIPERTERESE------EEPVEDANNSSHESRVGLASSIERQKKAVVPLAVVSTLTF 1159

  Fly   295 ------CGTVVHLRQPF----------NATRITAAG--INAR-------VEQLVK--------GG 326
                  .|..::.|:.|          .:.|:.::.  :|..       |:|.|.        ..
Zfish  1160 LGLIFLIGIYIYWRKCFQTAHFYIEDSTSPRVISSSPLLNPTGEHEPLPVKQFVNHVTELHNTSS 1224

  Fly   327 FWEEFESLQQ--DSRDTFSRNEG------YKQENRLKNRYRNILPYDHTRVKL--LDVEHSVAGA 381
            |..|||.|::  :...|.:.:.|      ...:|:.||||.|||.|||:||:|  |:.:...:|.
Zfish  1225 FSREFEILKEYFEEVQTCTVDLGTTTDCSNHPDNKNKNRYVNILAYDHSRVRLAPLNDKDGKSGG 1289

  Fly   382 EYINANYIRLPTDGDLYNMSSSSESLNSSVPSCPACTAAQTQRNCSNCQLQNKTCVQCAVKSAIL 446
            :||||||:                                                         
Zfish  1290 DYINANYV--------------------------------------------------------- 1297

  Fly   447 PYSNCATCSRKSDSLSKHKRSESSASSSPSSGSGSGPGSSGTSGVSSVNGPGTPTNLTSGTAGCL 511
                        |..:|:                                               
Zfish  1298 ------------DGFNKN----------------------------------------------- 1303

  Fly   512 VGLLKRHSNDSSGAVSISMAEREREREREMFKTYIATQGCLLTQQVNTVTDFWNMVWQENTRVIV 576
                                           |.|||.||.|    .::..|||.|||::|..|||
Zfish  1304 -------------------------------KAYIAAQGPL----KSSTPDFWRMVWEQNVGVIV 1333

  Fly   577 MTTKEYERGKEKCARYWPDEGRSEQFGHARIQCVSENSTSDYTLREFLV----------SWRDQP 631
            |.|...|:|::||.:|||.|.: |::|...:...|.|..:.||.|.|.:          .:|.. 
Zfish  1334 MITNLVEKGRKKCDQYWPLENQ-EEYGCFLVTVKSTNVLAYYTKRTFTLRNTSIKKGSQRYRSN- 1396

  Fly   632 ARRIFHYHFQVWPDHGVPADPGCVLNFLQDVNTRQSHLAQAGEKPGPICVHCSAGIGRTGTFIVI 696
            .|.:..||:..|||.|||.....||:|:...:..|:      :..||:.||||||:|||||:||:
Zfish  1397 ERTVTQYHYTQWPDMGVPEYVLPVLSFVYKSSKAQT------DGMGPMVVHCSAGVGRTGTYIVL 1455

  Fly   697 DMILDQIVRNGLDTEIDIQRTIQMVRSQRSGLVQTEAQYKFVYYA----------------VQHY 745
            |.:|.||...|   .::|...::.:|:||:.|||||.||.|.:.|                :..|
Zfish  1456 DSMLKQIKEKG---TVNIMGFLKHIRTQRNYLVQTEEQYIFTHDALVEAILSQETEVSSSHIHQY 1517

  Fly   746 IQTLI-----ARKRAEEQSLQVGREYTNIKYTGEIGNDSQRSPLPPAIS--------SISLVPSK 797
            :..|:     .:.|.|:|...|.:            ::::::....|:|        :.||:|.:
Zfish  1518 VNNLLTPGASCKTRLEKQFKLVCQ------------SNAKQNDCSAALSDCNRTKNRNCSLIPVE 1570

  Fly   798 TPLTPTSADLG-TGMGLSMGVGMGV-GNKHASKQQPPLP 834
            ......|:..| |...::....||. .||.....|.|||
Zfish  1571 KSRVCVSSSAGETSDYINASYVMGYRQNKEFIITQNPLP 1609

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cswNP_477131.1 SH2_C-SH2_SHP_like 211..307 CDD:198185 27/175 (15%)
PTPc-N11_6 352..748 CDD:350392 107/423 (25%)
ptprz1aXP_005163194.2 None

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