DRSC/TRiP Functional Genomics Resources

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Protein Alignment csw and Ptprz1

DIOPT Version :10

Sequence 1:NP_477131.1 Gene:csw / 45278 FlyBaseID:FBgn0000382 Length:945 Species:Drosophila melanogaster
Sequence 2:NP_037212.2 Gene:Ptprz1 / 25613 RGDID:3455 Length:2316 Species:Rattus norvegicus


Alignment Length:853 Identity:179/853 - (20%)
Similarity:272/853 - (31%) Gaps:369/853 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 NKCL---------EKL-------SSSL---GNVVNHKLQEKQVYNNNNINNNNNNT--------- 40
            |||:         ||:       .|||   .:.::|.|.|       |....|..|         
  Rat  1446 NKCMSCSPYRESQEKVMNDSDTQESSLVDQSDPISHLLSE-------NTEEENGGTGVTRVDKSP 1503

  Fly    41 ---------LNNNNAYNNQRNFEYERAIQAHY-GSKG---RRSEERERSGKFKASKGRKAKVTPP 92
                     ...:|.....|:.:...|:..|. |||.   ..|:|...||:..:......:.:..
  Rat  1504 DKSPPPSMLPQKHNDGREDRDIQMGSAVLPHTPGSKAWAVLTSDEESGSGQGTSDSLNDNETSTD 1568

  Fly    93 TETPEAQEPACKNCMTHDELAQIIKGVAKGADAQRNRDNRLQRRRRPLSAQPSAA---ASASTST 154
            ...|:..|......:..|:     .|:|.|:               |.|:.||..   :..|.|:
  Rat  1569 FSFPDVNEKDADGVLEADD-----TGIAPGS---------------PRSSTPSVTSGHSGVSNSS 1613

  Fly   155 ESLHRLTPSPQASYPATPTSWTATPPQFPAAFGGASCSNSTLSLLATMRVQLHGYTWFH----GN 215
            |                                 |..|||:                 |    |.
  Rat  1614 E---------------------------------AEASNSS-----------------HESRIGL 1628

  Fly   216 LSGKEAEK-----LILERGKNGSFLVRESQSKPGDFVLSVRTDDKVTHVMIRWQDKKYDVGGGES 275
            ..|.|:||     |::........||                  .:..::|.|:         :.
  Rat  1629 AEGLESEKKAVIPLVIVSALTFICLV------------------VLVGILIYWR---------KC 1666

  Fly   276 FGTLSELIDHYKRNPMVETCGT-VVHLRQPFNATRIT-----AAGINARVEQLVKGGFWEEFESL 334
            |.|....::......::.|..| :..:.....|..|.     .|.::|      ..||.||||:|
  Rat  1667 FQTAHFYLEDNTSPRVISTPPTPIFPISDDIGAIPIKHFPKHVADLHA------SNGFTEEFETL 1725

  Fly   335 QQDSRDT--------FSRNEGYKQENRLKNRYRNILPYDHTRVKLLDV-EHSVAGAEYINANYIR 390
            ::..::.        .:.:.....:|:.||||.||:.|||:||||..: |......:||||||: 
  Rat  1726 KEFYQEVQSCTVDLGITADSSNHPDNKHKNRYVNIVAYDHSRVKLTQLAEKDGKLTDYINANYV- 1789

  Fly   391 LPTDGDLYNMSSSSESLNSSVPSCPACTAAQTQRNCSNCQLQNKTCVQCAVKSAILPYSNCATCS 455
               ||  ||..                                                      
  Rat  1790 ---DG--YNRP------------------------------------------------------ 1795

  Fly   456 RKSDSLSKHKRSESSASSSPSSGSGSGPGSSGTSGVSSVNGPGTPTNLTSGTAGCLVGLLKRHSN 520
                                                                             
  Rat  1796 ----------------------------------------------------------------- 1795

  Fly   521 DSSGAVSISMAEREREREREMFKTYIATQGCLLTQQVNTVTDFWNMVWQENTRVIVMTTKEYERG 585
                                  |.|||.||.|    .:|..|||.|:|:.|..||||.|...|:|
  Rat  1796 ----------------------KAYIAAQGPL----KSTAEDFWRMIWEHNVEVIVMITNLVEKG 1834

  Fly   586 KEKCARYWPDEGRSEQFG-----HARIQCVSENSTSDYTLREFLVSWRDQPARR----IFHYHFQ 641
            :.||.:|||.:| ||::|     ...:|.::..:..::|||...:....|..|.    :..||:.
  Rat  1835 RRKCDQYWPTDG-SEEYGSFLVNQKNVQVLAYYTVRNFTLRNTKIKKGSQKGRSSGRLVTQYHYT 1898

  Fly   642 VWPDHGVPADPGCVLNFLQDVNTRQSHLAQAGEKPGPICVHCSAGIGRTGTFIVIDMILDQIVRN 706
            .|||.|||.....||.|::.....:.|..      ||:.||||||:|||||:||:|.:|.||...
  Rat  1899 QWPDMGVPEYSLPVLAFVRKTAQAKRHAV------GPVVVHCSAGVGRTGTYIVLDSMLQQIQHE 1957

  Fly   707 GLDTEIDIQRTIQMVRSQRSGLVQTEAQYKFVYYA----------------VQHYIQTLI----- 750
            |   .::|...::.:||||:.|||||.||.|::..                :..|:.||:     
  Rat  1958 G---TVNIFGFLKHIRSQRNYLVQTEEQYVFIHDTLVEAILSKETEVPDSHIHSYVNTLLIPGPS 2019

  Fly   751 ARKRAEEQ 758
            .:.:.|:|
  Rat  2020 GKTKLEKQ 2027

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cswNP_477131.1 SH2_C-SH2_SHP_like 211..307 CDD:198185 15/105 (14%)
PTPc-N11_6 352..748 CDD:350392 107/421 (25%)
Ptprz1NP_037212.2 alpha_CARP_receptor_like 45..298 CDD:239396
fn3 313..401 CDD:394996
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 433..499
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 518..537
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 586..624
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 636..720
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1141..1172
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1204..1228
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1401..1521 15/81 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1545..1622 21/146 (14%)
PTP_DSP_cys 1718..1995 CDD:475123 112/437 (26%)
R-PTP-Z-2 2078..2281 CDD:350507
Blue background indicates that the domain is not in the aligned region.

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