DRSC/TRiP Functional Genomics Resources

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Protein Alignment csw and pyp1

DIOPT Version :10

Sequence 1:NP_477131.1 Gene:csw / 45278 FlyBaseID:FBgn0000382 Length:945 Species:Drosophila melanogaster
Sequence 2:NP_594885.1 Gene:pyp1 / 2542677 PomBaseID:SPAC26F1.10C Length:550 Species:Schizosaccharomyces pombe


Alignment Length:484 Identity:114/484 - (23%)
Similarity:191/484 - (39%) Gaps:131/484 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   328 WEEFESL-------------------QQDSRDTFSRNEGY--KQENRLKNRYRNILPYDHTRVKL 371
            |:||.|:                   ::..::::|.:.|.  ...:::..:|.:::.....:.||
pombe   109 WQEFSSILVCVPAWIANYVTNAEVIGEKFRKESYSGDFGILDLDYSKVSGKYPSVIDNSPVKSKL 173

  Fly   372 -----------------LDVEHSVAGAEY--------------INANYIRLPTDGDLYNMSSSSE 405
                             ..:..|..|::|              :|..:..||.:.|  |.||...
pombe   174 GALPSARPRLSYSAAQTAPISLSSEGSDYFSRPPPTPNVAGLSLNNFFCPLPENKD--NKSSPFG 236

  Fly   406 SLNSSVPSCPACTAAQTQRNCSNCQLQNKTCVQCAVKSAILPYSNCATCSRKS------DSLSKH 464
            |.....|...:...|.|..:.:       |..|..::...|.:....:||.::      ||||..
pombe   237 SATVQTPCLHSVPDAFTNPDVA-------TLYQKFLRLQSLEHQRLVSCSDRNSQWSTVDSLSNT 294

  Fly   465 KRSESSASSSPSSGSGSGPGSSGTSGVSSVNGPGTPTNLTSGTAGCLVGLLKRHSNDSSGAVSIS 529
            ...::..:..                        .|.|       |....|||.|......::.|
pombe   295 SYKKNRYTDI------------------------VPYN-------CTRVHLKRTSPSELDYINAS 328

  Fly   530 MAEREREREREMFKTYIATQGCLLTQQVNTVTDFWNMVWQ--ENTRVIVMTTKEYERGKEKCARY 592
            ..:.|.       ..|||.||.:    ..:::|||:|||.  ||...|||....:|.|:|.|..|
pombe   329 FIKTET-------SNYIACQGSI----SRSISDFWHMVWDNVENIGTIVMLGSLFEAGREMCTAY 382

  Fly   593 WPDEGRSEQ--FGHARIQCVSENS--TSDYTLREFLVSWRDQPA-RRIFHYHFQVWPDHGVPADP 652
            ||..|..::  :|...::.:||.:  .|.:.||:|.:...:.|: :::.||.:..|.|...|.:.
pombe   383 WPSNGIGDKQVYGDYCVKQISEENVDNSRFILRKFEIQNANFPSVKKVHHYQYPNWSDCNSPENV 447

  Fly   653 GCVLNFLQDVNTRQSHLAQAGEKPGPICVHCSAGIGRTGTFIVIDMIL--DQIVRNGL-----DT 710
            ..::.||:.||  .||      ..|...||||||:||||||||:|.||  .:...:|.     |:
pombe   448 KSMVEFLKYVN--NSH------GSGNTIVHCSAGVGRTGTFIVLDTILRFPESKLSGFNPSVADS 504

  Fly   711 EIDIQRTIQMVRSQRSGLVQTEAQYKFVY 739
            ...:.:.:..:|.||..:|||..|:|:||
pombe   505 SDVVFQLVDHIRKQRMKMVQTFTQFKYVY 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cswNP_477131.1 SH2_C-SH2_SHP_like 211..307 CDD:198185
PTPc-N11_6 352..748 CDD:350392 108/439 (25%)
pyp1NP_594885.1 RHOD 41..161 CDD:444705 6/51 (12%)
PTPc 271..536 CDD:214550 88/313 (28%)
Blue background indicates that the domain is not in the aligned region.

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