DRSC/TRiP Functional Genomics Resources

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Protein Alignment csw and ZK616.65

DIOPT Version :10

Sequence 1:NP_477131.1 Gene:csw / 45278 FlyBaseID:FBgn0000382 Length:945 Species:Drosophila melanogaster
Sequence 2:NP_001293838.1 Gene:ZK616.65 / 24105295 WormBaseID:WBGene00235383 Length:543 Species:Caenorhabditis elegans


Alignment Length:725 Identity:146/725 - (20%)
Similarity:239/725 - (32%) Gaps:248/725 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 NAYNNQRNFEYERAIQAHYGSKGRRSEERERSGKFKASKGRKAKVTPPTETPEAQEPACKNCMTH 109
            |.:|.:...|..:..:|..|||..:|               |.|.:|..:..|            
 Worm     2 NMFNRKAKQEVTKKPEASNGSKNSKS---------------KTKFSPNQKRRE------------ 39

  Fly   110 DELAQIIKGVAKGADAQRNRDNRLQRRRRPLSAQPSAAASAS---TSTESLHRLTPSPQASYPAT 171
                      .|.:|:.....::..||.:|:.|.||:.:..|   ...:|:..:........|.:
 Worm    40 ----------VKKSDSDTESSHKNTRRGKPVPAPPSSNSKGSNDKNKRKSVQEVVKKVVNHIPFS 94

  Fly   172 PTSW-TATPPQFPAAFGGASCSNSTLSLLATMRVQLHGYTWFHGNLSGKEAEKLILERGKNGSFL 235
            |:.. |:|||.                              ..||  .|..:..::||.      
 Worm    95 PSKQPTSTPPV------------------------------SEGN--RKRLQTKVVERS------ 121

  Fly   236 VRESQSKPGDFVLSVRTDDKVTHVMIRWQDKKYDVGGGESFGTLSELI--DHYKRNPMVETCGTV 298
             .:.:|:...||..:..:::          :........|....:|.:  .:.||:|...|    
 Worm   122 -NQIESEMDSFVKKIEPNER----------RATQYNHSNSLSGSNEAVPPGNVKRSPQKAT---- 171

  Fly   299 VHLRQPFNATRITAAGINARVEQLVKGGFWEEFESLQQDSRDTFSRNEGYKQENRLKNRYRNILP 363
                .|...|| :..|::...|.:        :....:.|.|              |.:.....|
 Worm   172 ----HPIRTTR-SLIGLDGETEAV--------YSKTSKTSPD--------------KGKVTADSP 209

  Fly   364 YDHTRVKLLDVEH-------SVAGAEYINANYIRLPTDGDLYNMSSSSESLN------SSVPSCP 415
            ......|.|:...       |:|..|.....|.:|..|   :.|||...:|:      |::|..|
 Worm   210 RSRRTSKSLEENSSEANDSISLADDEETREAYRKLFKD---FAMSSQKMTLDDFKQEFSNLPGDP 271

  Fly   416 ---ACTAAQTQRNCSNCQLQNKTCVQCA-VKSAILPYSNCATCSRKSDSLSKHKRSESSASSSPS 476
               .|||.....|....:..|..|:..: |:..::|..|                          
 Worm   272 PSDLCTAFNQPVNNKKNRYLNIPCLDISRVQLKVMPNKN-------------------------- 310

  Fly   477 SGSGSGPGSSGTSGVSSVNGPGTPTNLTSGTAGCLVGLLKRHSNDSSGAVSISMAEREREREREM 541
                    |:.....:.:..|                .|||                        
 Worm   311 --------STDYIHANYIRSP----------------FLKR------------------------ 327

  Fly   542 FKTYIATQGCLLTQQVNTVTDFWNMVWQENTRVIVMTTKEYERGKEKCARYWPDEGR-SEQFGHA 605
              .||.|||    .:..|..|||.|:|||||..|||..:..|..:||||.|:|.... ..||...
 Worm   328 --GYILTQG----PKKETRADFWRMIWQENTTAIVMLCQFTETNREKCAEYFPRNAHCCLQFDKM 386

  Fly   606 RIQCVSENSTSDYTLREFLVSWR-----DQPARRIFHYHFQVWPDHGVPADPGCVLNFLQDVNTR 665
            .:      |..|.|:.:.||:.|     :...|.|.|:.::.|||..||.....:|..|:.:..|
 Worm   387 SV------SYEDSTVNKSLVTTRLNLSYEGETRLITHWLWKEWPDWQVPGSSEVMLKILRKIRAR 445

  Fly   666 QSHLAQAGEKPGPICVHCSAGIGRTGTFIVIDMILDQIVRNGLDTEIDIQRTIQMVR-SQRSGLV 729
            .:          |..:|||||:||:||.:.:::.|..|  :...|..||::.:..:| :.|:..|
 Worm   446 ST----------PPVIHCSAGVGRSGTLMAVEIALQSI--HSHFTLPDIKQIVSHLRVTGRAASV 498

  Fly   730 QTEAQYKFVY 739
            ||..||..::
 Worm   499 QTLQQYMLIW 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cswNP_477131.1 SH2_C-SH2_SHP_like 211..307 CDD:198185 15/97 (15%)
PTPc-N11_6 352..748 CDD:350392 97/412 (24%)
ZK616.65NP_001293838.1 PTZ00108 <9..236 CDD:240271 53/343 (15%)
PTPc 260..513 CDD:214550 83/347 (24%)

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