DRSC/TRiP Functional Genomics Resources

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Protein Alignment csw and Ptprc

DIOPT Version :10

Sequence 1:NP_477131.1 Gene:csw / 45278 FlyBaseID:FBgn0000382 Length:945 Species:Drosophila melanogaster
Sequence 2:NP_001104786.2 Gene:Ptprc / 19264 MGIID:97810 Length:1293 Species:Mus musculus


Alignment Length:433 Identity:112/433 - (25%)
Similarity:159/433 - (36%) Gaps:183/433 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   327 FWEEFESLQQDSRDTFSR---NEGYKQENRLKNRYRNILPYDHTRVKLLDVEHSVAGAEYINANY 388
            |..||:|:.:    .||:   .:..|..|:.||||.:|||||:.||:|.:: :..||:.||||:|
Mouse   642 FLAEFQSIPR----VFSKFPIKDARKPHNQNKNRYVDILPYDYNRVELSEI-NGDAGSTYINASY 701

  Fly   389 IRLPTDGDLYNMSSSSESLNSSVPSCPACTAAQTQRNCSNCQLQNKTCVQCAVKSAILPYSNCAT 453
            |    ||                                                          
Mouse   702 I----DG---------------------------------------------------------- 704

  Fly   454 CSRKSDSLSKHKRSESSASSSPSSGSGSGPGSSGTSGVSSVNGPGTPTNLTSGTAGCLVGLLKRH 518
                                                                             
Mouse   705 ----------------------------------------------------------------- 704

  Fly   519 SNDSSGAVSISMAEREREREREMFK---TYIATQGCLLTQQVNTVTDFWNMVWQENTRVIVMTTK 580
                                   ||   .|||.||    .:..||.|||.|:|::...||||.|:
Mouse   705 -----------------------FKEPRKYIAAQG----PRDETVDDFWRMIWEQKATVIVMVTR 742

  Fly   581 EYERGKEKCARYWP--DEGRSEQFGHARIQCVSENSTSDYTLREFLVSWRDQPA--RRIFHYHFQ 641
            ..|..:.|||.|||  :|| :..|....:.........||.:::..|:.:.:.|  |.:.|..|.
Mouse   743 CEEGNRNKCAEYWPSMEEG-TRAFKDIVVTINDHKRCPDYIIQKLNVAHKKEKATGREVTHIQFT 806

  Fly   642 VWPDHGVPADPGCVLNFLQDVNTRQSHLAQAGEKPGPICVHCSAGIGRTGTFIVIDMILDQIVRN 706
            .|||||||.||..:|...:.||...:..:      |||.||||||:|||||:|.||.:|:     
Mouse   807 SWPDHGVPEDPHLLLKLRRRVNAFSNFFS------GPIVVHCSAGVGRTGTYIGIDAMLE----- 860

  Fly   707 GLDTE--IDIQRTIQMVRSQRSGLVQTEAQYKFVYYAVQHYIQ 747
            ||:.|  :|:...:..:|.||..:||.||||..::.|:..|.|
Mouse   861 GLEAEGKVDVYGYVVKLRRQRCLMVQVEAQYILIHQALVEYNQ 903

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cswNP_477131.1 SH2_C-SH2_SHP_like 211..307 CDD:198185
PTPc-N11_6 352..748 CDD:350392 105/405 (26%)
PtprcNP_001104786.2 PTP_N 7..31 CDD:403599
DUF5585 <19..>181 CDD:465521
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 43..174
CD45 212..265 CDD:432641
FN3 393..451 CDD:238020
FN3 474..553 CDD:238020
R-PTPc-C-1 696..896 CDD:350405 87/365 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 980..1003
R-PTP-C-2 1006..1211 CDD:350406
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1240..1293
Blue background indicates that the domain is not in the aligned region.

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