DRSC/TRiP Functional Genomics Resources

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Protein Alignment csw and Ptpn4

DIOPT Version :10

Sequence 1:NP_477131.1 Gene:csw / 45278 FlyBaseID:FBgn0000382 Length:945 Species:Drosophila melanogaster
Sequence 2:NP_064317.2 Gene:Ptpn4 / 19258 MGIID:1099792 Length:926 Species:Mus musculus


Alignment Length:823 Identity:177/823 - (21%)
Similarity:261/823 - (31%) Gaps:361/823 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 QRNFEYERAIQAHY---GSK----GRRSEERERSGKFKASKGRKAKVTPPTETPEAQEPACKNCM 107
            |:||      .|||   |||    ||...:..:.||.||:|.|....:|       .:|..:..|
Mouse   317 QKNF------FAHYFTLGSKFRYCGRTEVQSVQYGKEKANKDRVFARSP-------SKPLARKLM 368

  Fly   108 THDELAQIIKGVAKGADAQRN--RDNRLQRRRRPLSAQPSAAASASTS-TESLHRLTP------- 162
            ..:.::             ||  .|:||:.:..|..:.|......::| |:...|:.|       
Mouse   369 DWEVVS-------------RNSLSDDRLETQSLPSRSPPGTPNHRNSSFTQEATRVRPSSVGHLV 420

  Fly   163 -------------------SPQA------SYPATPTSWTATPPQFPA------AFGGASCSNSTL 196
                               |.||      |.|:..|.....||..|.      ::.....|||..
Mouse   421 DHVVHMSPSEDFVSQRSPSSTQANSIVLESSPSQETPEDGQPPALPPKQSKKNSWNQIHFSNSQQ 485

  Fly   197 SL-----------------------------LATMRVQLHGYTWFHGNLSG-------------- 218
            .|                             |..|:...:|...|  |:.|              
Mouse   486 DLVTHTNESFDVPSSPEKSTPNGGIPHDNLVLIKMKPDENGRFGF--NVKGGYDQKMPVIVSRVA 548

  Fly   219 ------------KEAEKLILERGKNGS---------FLVRESQSKPGDFVLSVRTD---DKVTHV 259
                        .|.::::|..|::.:         |:....:...|:.||.||.:   |.|...
Mouse   549 PGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASCEKHSGELVLLVRPNAVYDVVEEK 613

  Fly   260 MIRWQDKKYDVGGGESFGTLSELI--------DHYKRNPMVETCGTVVHLRQPFNATRITAAGIN 316
            :....|.:|          :.|..        ||..|..|::.                      
Mouse   614 LESEPDFQY----------IPEKAPLDSVHQDDHSLRESMIQL---------------------- 646

  Fly   317 ARVEQLVKGGFWEEFESLQQDSRDTFSRNEGYKQ------ENRLKNRYRNILPYDHTRVKLLDVE 375
              .|.|:.|....:|:.|       :.:..|...      :|..|||||:|.|||.|||.|...|
Mouse   647 --AEGLITGTVLAQFDQL-------YRKKPGMTMSCAKLPQNISKNRYRDISPYDATRVLLKGNE 702

  Fly   376 HSVAGAEYINANYIRLPTDGDLYNMSSSSESLNSSVPSCPACTAAQTQRNCSNCQLQNKTCVQCA 440
                  :|||||||                  |..:||                           
Mouse   703 ------DYINANYI------------------NMEIPS--------------------------- 716

  Fly   441 VKSAILPYSNCATCSRKSDSLSKHKRSESSASSSPSSGSGSGPGSSGTSGVSSVNGPGTPTNLTS 505
                                                               ||:           
Mouse   717 ---------------------------------------------------SSI----------- 719

  Fly   506 GTAGCLVGLLKRHSNDSSGAVSISMAEREREREREMFKTYIATQGCLLTQQVNTVTDFWNMVWQE 570
                                                ...|||.||.|    .:|..|||.|.|::
Mouse   720 ------------------------------------INQYIACQGPL----PHTCKDFWQMTWEQ 744

  Fly   571 NTRVIVMTTKEYERGKEKCARYWPDEGRSEQFGHARIQCVSENSTSDYTLREF-LVSWRDQPARR 634
            .:.::||.|.:.|||:.||.:|||:...|..:|..::.|.||.....|..|:. |.:.....:|:
Mouse   745 GSSMVVMLTTQVERGRVKCHQYWPEPSESSSYGCYQVTCHSEEGNPAYIFRKMTLFNQEKNESRQ 809

  Fly   635 IFHYHFQVWPDHGVPADPGCVLNFLQDVNTRQSHLAQAGEKPGPICVHCSAGIGRTGTFIVIDMI 699
            :....:..|||||||.|....|:|:..|..:     :|| |..||.|||||||||||..|.::..
Mouse   810 LTQIQYTAWPDHGVPDDSSDFLDFVCHVRDQ-----RAG-KEEPIIVHCSAGIGRTGVLITMETA 868

  Fly   700 LDQIVRNGLDTEIDIQRTIQMVRSQRSGLVQTEAQYKFVYYAV 742
            :..|..|.....:||.||   :|.||:.::||.:||:||..|:
Mouse   869 MCLIECNQPVYPLDIVRT---MRDQRAMMIQTPSQYRFVCEAI 908

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cswNP_477131.1 SH2_C-SH2_SHP_like 211..307 CDD:198185 21/141 (15%)
PTPc-N11_6 352..748 CDD:350392 103/392 (26%)
Ptpn4NP_064317.2 B41 30..222 CDD:214604
FERM_C_PTPN4_PTPN3_like 216..310 CDD:270010
FA 324..365 CDD:462582 14/47 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 379..412 8/32 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 429..474 9/44 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 492..511 0/18 (0%)
PDZ_PTPN3-4-like 513..602 CDD:467190 13/90 (14%)
PTP_DSP_cys 641..914 CDD:475123 110/461 (24%)
Blue background indicates that the domain is not in the aligned region.

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