DRSC/TRiP Functional Genomics Resources

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Protein Alignment csw and C33H5.16

DIOPT Version :10

Sequence 1:NP_477131.1 Gene:csw / 45278 FlyBaseID:FBgn0000382 Length:945 Species:Drosophila melanogaster
Sequence 2:NP_501293.3 Gene:C33H5.16 / 183190 WormBaseID:WBGene00016382 Length:341 Species:Caenorhabditis elegans


Alignment Length:467 Identity:98/467 - (20%)
Similarity:167/467 - (35%) Gaps:191/467 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   322 LVKG--GFWEEFESLQQDSRDTFSRNEGYKQ-ENRLKNRYRNILPYDHTRVKLLDVEHSVAGAEY 383
            |.||  |...||.::::  .:.|.:.:.:|: ::..||||:::...|:.||||   .|.....:|
 Worm    44 LEKGPIGLRNEFNAMKR--FNDFDKMQSFKKAQDHHKNRYKDVGCLDNNRVKL---AHPPWPHDY 103

  Fly   384 INANYIRLPTDGDLYNMSSSSESLNSSVPSCPACTAAQTQRNCSNCQLQNKTCVQCAVKSAILPY 448
            |:||::                                                           
 Worm   104 IHANFV----------------------------------------------------------- 109

  Fly   449 SNCATCSRKSDSLSKHKRSESSASSSPSSGSGSGPGSSGTSGVSSVNGPGTPTNLTSGTAGCLVG 513
                                                             .||.|.          
 Worm   110 -------------------------------------------------STPANA---------- 115

  Fly   514 LLKRHSNDSSGAVSISMAEREREREREMFKTYIATQGCLLTQQVNTVTDFWNMVWQENTRVIVMT 578
                                         |.:|..|..|    .||..|||.|..||....|.|.
 Worm   116 -----------------------------KRFICAQAPL----DNTCADFWYMCLQERVEAIFML 147

  Fly   579 TKEYERGKEKCARYWPDEGRSEQFGHARIQCVSENSTSDYTLREFLVSWR----------DQPAR 633
            ....|:|.:||:.|:..:.:.|...|.:.|.::....:..|:: |:...:          :.|..
 Worm   148 CNLMEKGAKKCSEYYATKEKPELVFHEKDQKITVKYEASGTVK-FVKPTKAVVKETVLIIEGPGG 211

  Fly   634 RIF---HYHFQVWPDHGV-PADPGCVLNFLQDVNTRQSHLAQAGEKPGPICVHCSAGIGRTGTFI 694
            ::.   |||:..|||.|| |||    |:.::       .|.:|....|||.|||||||||||:.:
 Worm   212 QVLKTTHYHWIDWPDRGVPPAD----LSIIE-------LLIKARPLKGPIAVHCSAGIGRTGSVV 265

  Fly   695 VIDMILDQIVRNGLDTEIDIQRTIQMVRSQRSGLVQTEAQYKFVYYAVQHYIQTLIARKRAEEQS 759
            :|:.:.:|:: ||...| :..:.:|.:|.||:..:||:.||.||:..:.::   .:.:|..:|:.
 Worm   266 MIEYMCEQLL-NGNQIE-ETDKILQKIREQRNNSIQTDHQYLFVHQVMMNF---FLEKKLFDEEV 325

  Fly   760 LQVGREYTNIKY 771
            .:...::|: ||
 Worm   326 KKAHADFTH-KY 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cswNP_477131.1 SH2_C-SH2_SHP_like 211..307 CDD:198185
PTPc-N11_6 352..748 CDD:350392 85/409 (21%)
C33H5.16NP_501293.3 Y_phosphatase 76..313 CDD:459674 85/404 (21%)
Blue background indicates that the domain is not in the aligned region.

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