DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment csw and K07F5.8

DIOPT Version :10

Sequence 1:NP_477131.1 Gene:csw / 45278 FlyBaseID:FBgn0000382 Length:945 Species:Drosophila melanogaster
Sequence 2:NP_501766.1 Gene:K07F5.8 / 177833 WormBaseID:WBGene00010636 Length:284 Species:Caenorhabditis elegans


Alignment Length:445 Identity:92/445 - (20%)
Similarity:148/445 - (33%) Gaps:192/445 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   342 FSRNEGYK--QENRLKNRYRNILPYDHTRVKLLDVEHSVAGA---EYINANYIRLPTDGDLYNMS 401
            ||:.:.:|  ||:. ||||:::...|:.||||       .||   |||:|||:..||:       
 Worm     7 FSKMKAFKDAQEHG-KNRYKDVGCLDNNRVKL-------GGAWPHEYIHANYVSTPTN------- 56

  Fly   402 SSSESLNSSVPSCPACTAAQTQRNCSNCQLQNKTCVQCAVKSAILPYSNCATCSRKSDSLSKHKR 466
                      |....||.|..::.|:                                       
 Worm    57 ----------PKRFICTQAPLEKTCA--------------------------------------- 72

  Fly   467 SESSASSSPSSGSGSGPGSSGTSGVSSVNGPGTPTNLTSGTAGCLVGLLKRHSNDSSGAVSISMA 531
                                                                             
 Worm    73 ----------------------------------------------------------------- 72

  Fly   532 EREREREREMFKTYIATQGCLLTQQVNTVTDFWNMVWQENTRVIVMTTKEYERGKEKCARYWPDE 596
                                          |||.|..|:....|.|.....|:|.:||..|.|.|
 Worm    73 ------------------------------DFWFMCLQDRVETIFMLCNYKEKGAKKCHEYLPTE 107

  Fly   597 GRSE-------------QFGHARIQCVSENSTSDYTLREFLVSWRDQPARRIFHYHFQVWPDHGV 648
            ...:             :|..::.....:||.:..|.....|........::.|||:..|||.||
 Worm   108 DNKDTMSFKEKGQKVTVKFESSKAIKFRDNSAAKVTKTVLTVEGAGCDKLKVNHYHWIDWPDRGV 172

  Fly   649 PADPGCVLNFLQDVNTRQSHLAQAGEKPGPICVHCSAGIGRTGTFIVIDMILDQIVRNGLDTEID 713
            |.....:|..|:          :|....|||.|||||||||||:.::::.::||::...:..:.|
 Worm   173 PTADNAILELLE----------KARVSKGPIAVHCSAGIGRTGSVVMLEYVMDQLLAGQIIEDTD 227

  Fly   714 IQRTIQMVRSQRSGLVQTEAQYKFVYYAVQHYIQTLIARKRAEEQSLQVGREYTN 768
              :.||.:|.||:..|||:.||.||:..:.::.:   .|...:|.:..:.:::|:
 Worm   228 --KIIQKIREQRNNSVQTDHQYLFVHQVMMNFFE---KRGLLDEATSAIHKDFTD 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cswNP_477131.1 SH2_C-SH2_SHP_like 211..307 CDD:198185
PTPc-N11_6 352..748 CDD:350392 84/411 (20%)
K07F5.8NP_501766.1 Y_phosphatase 19..256 CDD:459674 84/407 (21%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.