DRSC/TRiP Functional Genomics Resources

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Protein Alignment csw and K07F5.8

DIOPT Version :9

Sequence 1:NP_477131.1 Gene:csw / 45278 FlyBaseID:FBgn0000382 Length:945 Species:Drosophila melanogaster
Sequence 2:NP_501766.1 Gene:K07F5.8 / 177833 WormBaseID:WBGene00010636 Length:284 Species:Caenorhabditis elegans


Alignment Length:445 Identity:92/445 - (20%)
Similarity:148/445 - (33%) Gaps:192/445 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   342 FSRNEGYK--QENRLKNRYRNILPYDHTRVKLLDVEHSVAGA---EYINANYIRLPTDGDLYNMS 401
            ||:.:.:|  ||:. ||||:::...|:.||||       .||   |||:|||:..||:       
 Worm     7 FSKMKAFKDAQEHG-KNRYKDVGCLDNNRVKL-------GGAWPHEYIHANYVSTPTN------- 56

  Fly   402 SSSESLNSSVPSCPACTAAQTQRNCSNCQLQNKTCVQCAVKSAILPYSNCATCSRKSDSLSKHKR 466
                      |....||.|..::.|:                                       
 Worm    57 ----------PKRFICTQAPLEKTCA--------------------------------------- 72

  Fly   467 SESSASSSPSSGSGSGPGSSGTSGVSSVNGPGTPTNLTSGTAGCLVGLLKRHSNDSSGAVSISMA 531
                                                                             
 Worm    73 ----------------------------------------------------------------- 72

  Fly   532 EREREREREMFKTYIATQGCLLTQQVNTVTDFWNMVWQENTRVIVMTTKEYERGKEKCARYWPDE 596
                                          |||.|..|:....|.|.....|:|.:||..|.|.|
 Worm    73 ------------------------------DFWFMCLQDRVETIFMLCNYKEKGAKKCHEYLPTE 107

  Fly   597 GRSE-------------QFGHARIQCVSENSTSDYTLREFLVSWRDQPARRIFHYHFQVWPDHGV 648
            ...:             :|..::.....:||.:..|.....|........::.|||:..|||.||
 Worm   108 DNKDTMSFKEKGQKVTVKFESSKAIKFRDNSAAKVTKTVLTVEGAGCDKLKVNHYHWIDWPDRGV 172

  Fly   649 PADPGCVLNFLQDVNTRQSHLAQAGEKPGPICVHCSAGIGRTGTFIVIDMILDQIVRNGLDTEID 713
            |.....:|..|:          :|....|||.|||||||||||:.::::.::||::...:..:.|
 Worm   173 PTADNAILELLE----------KARVSKGPIAVHCSAGIGRTGSVVMLEYVMDQLLAGQIIEDTD 227

  Fly   714 IQRTIQMVRSQRSGLVQTEAQYKFVYYAVQHYIQTLIARKRAEEQSLQVGREYTN 768
              :.||.:|.||:..|||:.||.||:..:.::.:   .|...:|.:..:.:::|:
 Worm   228 --KIIQKIREQRNNSVQTDHQYLFVHQVMMNFFE---KRGLLDEATSAIHKDFTD 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cswNP_477131.1 SH2_C-SH2_SHP_like 211..307 CDD:198185
PTPc 326..744 CDD:214550 89/419 (21%)
PTPc 543..743 CDD:238006 60/212 (28%)
K07F5.8NP_501766.1 Y_phosphatase 19..256 CDD:278528 84/407 (21%)
PTPc 20..256 CDD:238006 84/406 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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