DRSC/TRiP Functional Genomics Resources

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Protein Alignment csw and C55B7.3

DIOPT Version :10

Sequence 1:NP_477131.1 Gene:csw / 45278 FlyBaseID:FBgn0000382 Length:945 Species:Drosophila melanogaster
Sequence 2:NP_001367695.1 Gene:C55B7.3 / 172359 WormBaseID:WBGene00016942 Length:346 Species:Caenorhabditis elegans


Alignment Length:456 Identity:97/456 - (21%)
Similarity:155/456 - (33%) Gaps:199/456 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   326 GFWEEFESLQQDSRDTFSRNEGYKQENRL-KNRYRNILPYDHTRVKLLDVEHSVAGA---EYINA 386
            |...||..:::  .:.|.:.:.:|:.... ||||:::...|:.||||       .|.   |||:|
 Worm    55 GLRAEFVGMRR--FNDFEKMKAFKEAQEAGKNRYKDVGCLDNNRVKL-------EGPWPHEYIHA 110

  Fly   387 NYIRLPTDGDLYNMSSSSESLNSSVPSCPACTAAQTQRNCSNCQLQNKTCVQCAVKSAILPYSNC 451
            ||:..||:                 |....||.|..::.|:                        
 Worm   111 NYVATPTN-----------------PKRFICTQAPLEKTCA------------------------ 134

  Fly   452 ATCSRKSDSLSKHKRSESSASSSPSSGSGSGPGSSGTSGVSSVNGPGTPTNLTSGTAGCLVGLLK 516
                                                                             
 Worm   135 ----------------------------------------------------------------- 134

  Fly   517 RHSNDSSGAVSISMAEREREREREMFKTYIATQGCLLTQQVNTVTDFWNMVWQENTRVIVMTTKE 581
                                                         |||.|.:|:....|.|....
 Worm   135 ---------------------------------------------DFWYMCYQDKVEYIFMLCNL 154

  Fly   582 YERGKEKCARYWP---------DEGRSEQFGHARIQCVS-------ENSTSDYTLREFLVSWRDQ 630
            .|:|..||..|:|         :||..:    ..::|.|       .::.::.|..|.::....:
 Worm   155 LEKGARKCFEYFPSKKGDVMDFEEGGQK----ISVKCESSVTYSFRSDAKANVTATEIVIEGPGE 215

  Fly   631 PARRIFHYHFQVWPDHGVPADPGCVLNFLQDVNTRQSHLAQAGEKPGPICVHCSAGIGRTGTFIV 695
            ..|:..|||:..|||.||||....||..|:  |.|.|        .|||.|||||||||||:.::
 Worm   216 KTRKTTHYHWNDWPDRGVPAADMAVLELLE--NARPS--------KGPIVVHCSAGIGRTGSVVM 270

  Fly   696 IDMILDQIVRNGLDTEIDIQRTIQMVRSQRSGLVQTEAQYKFVYYAVQHYIQTLIARKRAEEQSL 760
            ::.|:||::...:..  |.::.:..:|.||:..:||:|||.||:..:.:|.:   .:|..||..:
 Worm   271 LEYIMDQLLAGQIID--DGEKILVKIREQRNNSIQTDAQYLFVHQVILNYFR---KKKLMEETGV 330

  Fly   761 Q 761
            |
 Worm   331 Q 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cswNP_477131.1 SH2_C-SH2_SHP_like 211..307 CDD:198185
PTPc-N11_6 352..748 CDD:350392 88/415 (21%)
C55B7.3NP_001367695.1 Y_phosphatase 83..317 CDD:459674 87/407 (21%)
Blue background indicates that the domain is not in the aligned region.

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