DRSC/TRiP Functional Genomics Resources

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Protein Alignment csw and C55B7.3

DIOPT Version :9

Sequence 1:NP_477131.1 Gene:csw / 45278 FlyBaseID:FBgn0000382 Length:945 Species:Drosophila melanogaster
Sequence 2:NP_001367695.1 Gene:C55B7.3 / 172359 WormBaseID:WBGene00016942 Length:346 Species:Caenorhabditis elegans


Alignment Length:456 Identity:97/456 - (21%)
Similarity:155/456 - (33%) Gaps:199/456 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   326 GFWEEFESLQQDSRDTFSRNEGYKQENRL-KNRYRNILPYDHTRVKLLDVEHSVAGA---EYINA 386
            |...||..:::  .:.|.:.:.:|:.... ||||:::...|:.||||       .|.   |||:|
 Worm    55 GLRAEFVGMRR--FNDFEKMKAFKEAQEAGKNRYKDVGCLDNNRVKL-------EGPWPHEYIHA 110

  Fly   387 NYIRLPTDGDLYNMSSSSESLNSSVPSCPACTAAQTQRNCSNCQLQNKTCVQCAVKSAILPYSNC 451
            ||:..||:                 |....||.|..::.|:                        
 Worm   111 NYVATPTN-----------------PKRFICTQAPLEKTCA------------------------ 134

  Fly   452 ATCSRKSDSLSKHKRSESSASSSPSSGSGSGPGSSGTSGVSSVNGPGTPTNLTSGTAGCLVGLLK 516
                                                                             
 Worm   135 ----------------------------------------------------------------- 134

  Fly   517 RHSNDSSGAVSISMAEREREREREMFKTYIATQGCLLTQQVNTVTDFWNMVWQENTRVIVMTTKE 581
                                                         |||.|.:|:....|.|....
 Worm   135 ---------------------------------------------DFWYMCYQDKVEYIFMLCNL 154

  Fly   582 YERGKEKCARYWP---------DEGRSEQFGHARIQCVS-------ENSTSDYTLREFLVSWRDQ 630
            .|:|..||..|:|         :||..:    ..::|.|       .::.::.|..|.::....:
 Worm   155 LEKGARKCFEYFPSKKGDVMDFEEGGQK----ISVKCESSVTYSFRSDAKANVTATEIVIEGPGE 215

  Fly   631 PARRIFHYHFQVWPDHGVPADPGCVLNFLQDVNTRQSHLAQAGEKPGPICVHCSAGIGRTGTFIV 695
            ..|:..|||:..|||.||||....||..|:  |.|.|        .|||.|||||||||||:.::
 Worm   216 KTRKTTHYHWNDWPDRGVPAADMAVLELLE--NARPS--------KGPIVVHCSAGIGRTGSVVM 270

  Fly   696 IDMILDQIVRNGLDTEIDIQRTIQMVRSQRSGLVQTEAQYKFVYYAVQHYIQTLIARKRAEEQSL 760
            ::.|:||::...:..  |.::.:..:|.||:..:||:|||.||:..:.:|.:   .:|..||..:
 Worm   271 LEYIMDQLLAGQIID--DGEKILVKIREQRNNSIQTDAQYLFVHQVILNYFR---KKKLMEETGV 330

  Fly   761 Q 761
            |
 Worm   331 Q 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cswNP_477131.1 SH2_C-SH2_SHP_like 211..307 CDD:198185
PTPc 326..744 CDD:214550 92/437 (21%)
PTPc 543..743 CDD:238006 64/215 (30%)
C55B7.3NP_001367695.1 Y_phosphatase 83..317 CDD:395053 87/407 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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