DRSC/TRiP Functional Genomics Resources

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Protein Alignment csw and F47B3.1

DIOPT Version :10

Sequence 1:NP_477131.1 Gene:csw / 45278 FlyBaseID:FBgn0000382 Length:945 Species:Drosophila melanogaster
Sequence 2:NP_491278.1 Gene:F47B3.1 / 171984 WormBaseID:WBGene00018525 Length:363 Species:Caenorhabditis elegans


Alignment Length:361 Identity:94/361 - (26%)
Similarity:145/361 - (40%) Gaps:89/361 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   451 CATCSRKSDSLSKHKR----SESSASSS-----PSSGSGSGPGSSGTSGVSSVNGPGTPTNLTSG 506
            |.....|:.:|.:.|:    :|||.:||     |::...:.|.|........|..|.....|..|
 Worm     2 CFAKKNKNSTLEQKKKDPEITESSKNSSQPSQVPAATPTAAPPSKAHQKAMIVVKPWVQRTLDMG 66

  Fly   507 TAGCL--VGLLKRHSNDSSGAVSISMAEREREREREM-----------F---------------- 542
            ....:  ..:|.:.:.:.....:.| |..::.|.:::           |                
 Worm    67 VQALVDEFRVLAKWTPEGMTTEAFS-ANTDKNRYQDVPCQDKGRIVVKFPGLASDYIHANYLGTA 130

  Fly   543 ---KTYIATQGCLLTQQVNTVTDFWNMVWQENTRVIVMTTKEYERGKEKCARYWP-DEGRSEQFG 603
               |.:|..||.|    .||...||.|..||....::|.....|.||.||.:||| ::|:...||
 Worm   131 TNPKKFICAQGPL----ENTQHSFWAMAIQEKVECVIMLCNCIETGKIKCHQYWPLEQGQKLVFG 191

  Fly   604 HA----------------RIQCVSENSTSDYTLREFLVSWRDQPARRIFHYHFQVWPDHGVPADP 652
            .|                ..||:  |.|   ||:   |.| .|.:|.|.|..::.|||.|||...
 Worm   192 EAPNTISVANLGAKKMAPDEQCI--NVT---TLK---VDW-GQGSRTIQHLQWENWPDRGVPQTN 247

  Fly   653 GCVLNFLQDVNTRQSHLAQAGEKPGPICVHCSAGIGRTGTFIVIDMILDQIVRNGLDTEIDIQRT 717
            ...:|.|......|:          ||.||||||||||||.:.|..:.|:::..  :..:.:...
 Worm   248 LTAINLLSATRGNQN----------PILVHCSAGIGRTGTIVAIAYVQDKMMAG--ENCMAMNEL 300

  Fly   718 IQMVRSQRSGLVQTEAQYKFVY-----YAVQHYIQT 748
            |:.:||.|...:|.|.||.:::     |.::.|.:|
 Worm   301 IKELRSHRPWSIQNEFQYLYLHRVLLSYFLERYKET 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cswNP_477131.1 SH2_C-SH2_SHP_like 211..307 CDD:198185
PTPc-N11_6 352..748 CDD:350392 93/359 (26%)
F47B3.1NP_491278.1 Y_phosphatase 93..326 CDD:459674 72/257 (28%)
Blue background indicates that the domain is not in the aligned region.

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