DRSC/TRiP Functional Genomics Resources

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Protein Alignment csw and PTPN21

DIOPT Version :10

Sequence 1:NP_477131.1 Gene:csw / 45278 FlyBaseID:FBgn0000382 Length:945 Species:Drosophila melanogaster
Sequence 2:NP_008970.2 Gene:PTPN21 / 11099 HGNCID:9651 Length:1174 Species:Homo sapiens


Alignment Length:802 Identity:170/802 - (21%)
Similarity:262/802 - (32%) Gaps:315/802 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 VNHKLQE----------KQVYNNNNINNNNNNTLNNNNAYNNQRNFEYERAIQAHYGSKGRRSEE 72
            |.|.|||          .|::..|:|                      |.|..:| |.:|.|.:|
Human   613 VAHSLQEVSEPLTAARHAQLHKRNSI----------------------EVAGLSH-GLEGLRLKE 654

  Fly    73 RERSGKFKASKGRKAKVTPPTETPEAQEPACKNCMTHDELAQIIKGVAKG-----ADA------- 125
            |..|..       .|:|.|...:..:| |:.....|..|..:..:|:..|     :||       
Human   655 RTLSAS-------AAEVAPRAVSVGSQ-PSVFTERTQREGPEEAEGLRYGHKKSLSDATMLIHSS 711

  Fly   126 QRNRDNRLQ------------RRRRPLSAQPSAAASASTSTESLHRLTPS---PQA------SYP 169
            :...|...:            |..||..||.............||.|.|.   |.|      |.|
Human   712 EEEEDEDFEEESGARAPPARAREPRPGLAQDPPGCPRVLLAGPLHILEPKAHVPDAEKRMMDSSP 776

  Fly   170 ATPTSWTATPPQFPAAFGGASCSNSTLSLLATMRVQLHGYTWFHGNLSGKEAEKLILERGKNGSF 234
            ...|:....|                               |..|.|....:|..:...|:..: 
Human   777 VRTTAEAQRP-------------------------------WRDGLLMPSMSESDLTTSGRYRA- 809

  Fly   235 LVRES-QSKPGDFVLSVRTDDKVTHVMIRWQDKKYDVGGGESFGTLSEL-IDHYKRNPMVETCGT 297
             .|:| :.:|...:||               .||..|.|....|.:.:. :|..|..|:......
Human   810 -RRDSLKKRPVSDLLS---------------GKKNIVEGLPPLGGMKKTRVDAKKIGPLKLAALN 858

  Fly   298 VVHL-RQPFN------ATRIT----AAGINARVEQLVKGGFWEEFESLQQ----DSRDTFSRNEG 347
            .:.| |.|..      |||.|    ...:..|:||   |..:.|:|.:.:    |...:.:|   
Human   859 GLSLSRVPLPDEGKEVATRATNDERCKILEQRLEQ---GMVFTEYERILKKRLVDGECSTAR--- 917

  Fly   348 YKQENRLKNRYRNILPYDHTRVKLLDVEHSVAGAEYINANYIRLPTDGDLYNMSSSSESLNSSVP 412
             ..||..:||::::||||..||:|:..:.:..|  ||||::|:                      
Human   918 -LPENAERNRFQDVLPYDDVRVELVPTKENNTG--YINASHIK---------------------- 957

  Fly   413 SCPACTAAQTQRNCSNCQLQNKTCVQCAVKSAILPYSNCATCSRKSDSLSKHKRSESSASSSPSS 477
                                                                             
Human   958 ----------------------------------------------------------------- 957

  Fly   478 GSGSGPGSSGTSGVSSVNGPGTPTNLTSGTAGCLVGLLKRHSNDSSGAVSISMAEREREREREMF 542
                                                            ||:|..|.:        
Human   958 ------------------------------------------------VSVSGIEWD-------- 966

  Fly   543 KTYIATQGCLLTQQVNTVTDFWNMVWQENTRVIVMTTKEYERGKEKCARYWPDEG-RSEQFGHAR 606
              ||||||.|    .||..|||.|||::...:|.|.|.|.|.|:||..||||..| |.....:.|
Human   967 --YIATQGPL----QNTCQDFWQMVWEQGIAIIAMVTAEEEGGREKSFRYWPRLGSRHNTVTYGR 1025

  Fly   607 IQCVSE-------NSTSDYTLREFLVSWRDQPARRIFHYHFQVWPDHGVPADPGCVLNFLQDVNT 664
            .:..:.       .:|:...::..|..    ..|.::|..:..||:||.|.|....|::|:::.:
Human  1026 FKITTRFRTDSGCYATTGLKMKHLLTG----QERTVWHLQYTDWPEHGCPEDLKGFLSYLEEIQS 1086

  Fly   665 RQSHLAQAGEKPG---PICVHCSAGIGRTGTFIVIDMILDQIVRNGLDTEIDIQRTIQMVRSQRS 726
            .:.|.....:...   |:.||||||:||||..|:.::::..:..|.:   :||.|.:.|:|.||.
Human  1087 VRRHTNSTSDPQSPNPPLLVHCSAGVGRTGVVILSEIMIACLEHNEV---LDIPRVLDMLRQQRM 1148

  Fly   727 GLVQTEAQYKFVYYAVQHYIQT 748
            .||||..||.|||..:..::::
Human  1149 MLVQTLCQYTFVYRVLIQFLKS 1170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cswNP_477131.1 SH2_C-SH2_SHP_like 211..307 CDD:198185 21/104 (20%)
PTPc-N11_6 352..748 CDD:350392 92/406 (23%)
PTPN21NP_008970.2 FERM_F1_PTPN21 20..106 CDD:340712
B41 24..222 CDD:214604
FERM_C_PTPN14_PTPN21 217..307 CDD:270009
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 396..445
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 673..692 4/19 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 711..745 6/33 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 769..806 8/67 (12%)
PTP_DSP_cys 883..1169 CDD:475123 101/450 (22%)
Blue background indicates that the domain is not in the aligned region.

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