DRSC/TRiP Functional Genomics Resources

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Protein Alignment csw and ptpn9a

DIOPT Version :10

Sequence 1:NP_477131.1 Gene:csw / 45278 FlyBaseID:FBgn0000382 Length:945 Species:Drosophila melanogaster
Sequence 2:XP_005163030.1 Gene:ptpn9a / 100526653 ZFINID:ZDB-GENE-101027-1 Length:571 Species:Danio rerio


Alignment Length:243 Identity:88/243 - (36%)
Similarity:132/243 - (54%) Gaps:23/243 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   515 LKRHSNDSSGAVSISMAEREREREREMFKTYIATQGCLLTQQVNTVTDFWNMVWQENTRVIVMTT 579
            ||...|:.|..::.|..:..:::     ..||.|||.|    ..|..|||.|||::|..||||||
Zfish   333 LKARRNERSDYINASFMDGYKQK-----NAYIGTQGPL----EKTYGDFWRMVWEQNVLVIVMTT 388

  Fly   580 KEYERGKEKCARYWP-DEGRSEQFGHARI--QCVSENSTSDYTLREFLVSWRDQPARRIFHYHFQ 641
            :..|.|:.||.:||| :||..|.:|:..:  ..|..::..:.|..| |.:......|::.|:.|.
Zfish   389 RTDEGGRRKCGQYWPQEEGGQEVYGYIAVVNHRVDNHAHYNQTTLE-LHNTETFEQRQVTHFQFL 452

  Fly   642 VWPDHGVPADPGCVLNFLQDVNTRQSHLAQA------GEKPG-PICVHCSAGIGRTGTFIVIDMI 699
            .|||:|||:....:::||..|..:|....||      |...| |:.|||||||||||||..:|:.
Zfish   453 SWPDYGVPSSAVSLIDFLGAVKHQQQWAVQAFGTQWRGHPLGPPMVVHCSAGIGRTGTFCALDIC 517

  Fly   700 LDQIVRNGLDTEIDIQRTIQMVRSQRSGLVQTEAQYKFVYYAVQHYIQ 747
            |.|:...|   .::|.:|::.:||||:..:||..||.|.:.|:..:.|
Zfish   518 LSQLQDVG---TLNICQTVRRMRSQRAFSIQTPEQYYFCHAAILEHAQ 562

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cswNP_477131.1 SH2_C-SH2_SHP_like 211..307 CDD:198185
PTPc-N11_6 352..748 CDD:350392 88/243 (36%)
ptpn9aXP_005163030.1 CRAL_TRIO_N 11..59 CDD:215024
SEC14 81..231 CDD:214706
PTPc-N9 286..554 CDD:350391 86/233 (37%)
Blue background indicates that the domain is not in the aligned region.

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