DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosbeta5 and PAF2

DIOPT Version :10

Sequence 1:NP_652014.1 Gene:Prosbeta5 / 45269 FlyBaseID:FBgn0029134 Length:282 Species:Drosophila melanogaster
Sequence 2:NP_175158.1 Gene:PAF2 / 841128 AraportID:AT1G47250 Length:277 Species:Arabidopsis thaliana


Alignment Length:218 Identity:50/218 - (22%)
Similarity:91/218 - (41%) Gaps:31/218 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 GTTTLGFKFKGGVLLAVDSRATGGSYIGSQSMKKIVEINQFMLGTLAGGAADCVYWDRVLSKECR 137
            |:..:|.:.:..|:||..::|....   |...:||.:::..:...:||..||    .||||:..|
plant    32 GSAAIGLRSRSHVVLACVNKAQSEL---SSHQRKIFKVDDHIGVAIAGLTAD----GRVLSRYMR 89

  Fly   138 LHELRNK---------ERISVAAASKIMANIAHEYK---GMGLSMGMMLAGYDKRGPGLYYVDSE 190
            ...:.:.         .|:.|..|.|........:|   |:||.:|    |.|:.|..|||....
plant    90 SESINHSFTYESPLPVGRLVVHLADKAQVCTQRSWKRPYGVGLLVG----GLDESGAHLYYNCPS 150

  Fly   191 GSRTPGNLFSVGSGSLYAYGVLDSGYHWDLEDKEAQELGRRAIYHATFRDAYSGGIIRVYHIKED 255
            |:......|::||.|..|...|:..:. ..::...::|.:.||  ...|:...|..::    ...
plant   151 GNYFEYQAFAIGSRSQAAKTYLERKFE-SFQESSKEDLIKDAI--MAIRETLQGETLK----SSL 208

  Fly   256 GWVNISNTDCMELHYMYQEQLKQ 278
            ..|::...| ...|::.||.:::
plant   209 CTVSVLGVD-EPFHFLDQESIQK 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta5NP_652014.1 proteasome_beta_type_5 74..261 CDD:239730 45/198 (23%)
PAF2NP_175158.1 proteasome_alpha_type_1 6..215 CDD:239718 46/200 (23%)

Return to query results.
Submit another query.