DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta5 and PBB1

DIOPT Version :10

Sequence 1:NP_652014.1 Gene:Prosbeta5 / 45269 FlyBaseID:FBgn0029134 Length:282 Species:Drosophila melanogaster
Sequence 2:NP_566818.1 Gene:PBB1 / 822364 AraportID:AT3G27430 Length:273 Species:Arabidopsis thaliana


Alignment Length:179 Identity:56/179 - (31%)
Similarity:85/179 - (47%) Gaps:5/179 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 GTTTLGFKFKGGVLLAVDSRATGGSYIGSQSMKKI--VEINQFMLGTLAGGAADCVYWDRVLSKE 135
            |||.:|..||.||:|..|:|||.|..:..::.:||  :..|.:..|  ||.|||......::|.:
plant    39 GTTIVGLIFKDGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCG--AGTAADTEAVTDMVSSQ 101

  Fly   136 CRLHELRNKERISVAAASKIMANIAHEYKGMGLSMGMMLAGYDKRGPGLYYVDSEGSRTPGNLFS 200
            .|||..:......|..|..::......|:| .:|..::|.|.|..||.|:.:...||.......:
plant   102 LRLHRYQTGRDSRVITALTLLKKHLFSYQG-HVSAALVLGGVDITGPHLHTIYPHGSTDTLPFAT 165

  Fly   201 VGSGSLYAYGVLDSGYHWDLEDKEAQELGRRAIYHATFRDAYSGGIIRV 249
            :|||||.|..|.::.|...|...|..:|...:|....|.|..||..:.:
plant   166 MGSGSLAAMSVFEAKYKEGLTRDEGIKLVAESICSGIFNDLGSGSNVDI 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta5NP_652014.1 proteasome_beta_type_5 74..261 CDD:239730 55/178 (31%)
PBB1NP_566818.1 proteasome_beta_type_7 40..228 CDD:239732 55/178 (31%)

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