DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosbeta5 and Psmb11

DIOPT Version :9

Sequence 1:NP_652014.1 Gene:Prosbeta5 / 45269 FlyBaseID:FBgn0029134 Length:282 Species:Drosophila melanogaster
Sequence 2:NP_780413.1 Gene:Psmb11 / 73902 MGIID:1921152 Length:302 Species:Mus musculus


Alignment Length:292 Identity:110/292 - (37%)
Similarity:167/292 - (57%) Gaps:51/292 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MALAEICKISNAPYMRPNAWSSADVEEEQKGLMCNLANPYTLAAPPFENPLHNLNQIQANG---- 61
            |||.::||           |.:.|                        .|..:::..||.|    
Mouse     1 MALQDVCK-----------WQTPD------------------------TPRPSIHLPQAGGWAVP 30

  Fly    62 ----DKTGVKIN---FDHGTTTLGFKFKGGVLLAVDSRATGGSYIGSQSMKKIVEINQFMLGTLA 119
                .:|.::|:   ..||||||.|:|:.||:.|.|:|::.|||:...:.:|::.::|.:|||.:
Mouse    31 RGCDPQTFLQIHGPRLAHGTTTLAFRFRHGVIAAADTRSSCGSYVACPASRKVIPVHQRLLGTTS 95

  Fly   120 GGAADCVYWDRVLSKECRLHELRNKERISVAAASKIMANIAHEYKGMGLSMGMMLAGYDKRGPGL 184
            |.:|||..|.|||.:|.||.|||..:..|||..:|::|.:...|:|:.|.:...|.|:|..||.|
Mouse    96 GTSADCATWYRVLRRELRLRELREGQLPSVAGTAKLLAAMMSCYRGLDLCVATALCGWDHSGPAL 160

  Fly   185 YYVDSEGSRTPGNLFSVGSGSLYAYGVLDSGYHWDLEDKEAQELGRRAIYHATFRDAYSGGIIRV 249
            :||.|:|:...|::|||||||.|||||||.|||:|:..:||..|.|.|:.|||.|||||||.:.:
Mouse   161 FYVYSDGTCLQGDIFSVGSGSPYAYGVLDRGYHYDMTIQEAYTLARCAVAHATHRDAYSGGSVDL 225

  Fly   250 YHIKEDGWVNISNTD-CMELHYMYQEQLKQQA 280
            :|::|.||..:|.:| |:    :|:|..|.::
Mouse   226 FHVRESGWEYVSRSDACV----LYRELQKARS 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta5NP_652014.1 PTZ00488 38..272 CDD:185666 100/245 (41%)
proteasome_beta_type_5 74..261 CDD:239730 89/186 (48%)
Psmb11NP_780413.1 20S_bact_beta 48..253 CDD:163402 97/208 (47%)
proteasome_beta_type_5 50..237 CDD:239730 89/186 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D396507at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11599
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X647
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.880

Return to query results.
Submit another query.