DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta5 and PSMA6

DIOPT Version :9

Sequence 1:NP_652014.1 Gene:Prosbeta5 / 45269 FlyBaseID:FBgn0029134 Length:282 Species:Drosophila melanogaster
Sequence 2:NP_002782.1 Gene:PSMA6 / 5687 HGNCID:9535 Length:246 Species:Homo sapiens


Alignment Length:129 Identity:29/129 - (22%)
Similarity:54/129 - (41%) Gaps:16/129 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 GTTTLGFKFKGGVLLAVDSRATGGSYIGSQSMKKIVEINQFMLGTLAGGAADCVYWDRVLSKECR 137
            |.|::..:.|...:: |..:......:.|.::..:.:|.:.:...:.|..||    .|...:..|
Human    36 GLTSVAVRGKDCAVI-VTQKKVPDKLLDSSTVTHLFKITENIGCVMTGMTAD----SRSQVQRAR 95

  Fly   138 LHELRNKE-----RISVAAASKIMANIAHEY----KGMGLSMGMMLAGYD-KRGPGLYYVDSEG 191
             :|..|.:     .|.|....|.:|:|:..|    :...|...|:|.|.| ::||.:|..|..|
Human    96 -YEAANWKYKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAG 158

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta5NP_652014.1 PTZ00488 38..272 CDD:185666 29/129 (22%)
proteasome_beta_type_5 74..261 CDD:239730 28/128 (22%)
PSMA6NP_002782.1 proteasome_alpha_type_6 8..220 CDD:239723 29/129 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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