DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta5 and psmb2

DIOPT Version :10

Sequence 1:NP_652014.1 Gene:Prosbeta5 / 45269 FlyBaseID:FBgn0029134 Length:282 Species:Drosophila melanogaster
Sequence 2:NP_001002609.1 Gene:psmb2 / 436882 ZFINID:ZDB-GENE-040718-353 Length:199 Species:Danio rerio


Alignment Length:183 Identity:48/183 - (26%)
Similarity:83/183 - (45%) Gaps:3/183 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 LGFKFKGGVLLAVDSRATGGSYIGSQSMKKIVEINQFMLGTLAGGAADCVYWDRVLSKECRLHEL 141
            :|.:....||:|.|:.|............|:.::::.:|....|.|.|.|.:...:.|..:|:::
Zfish     5 IGIQGPDFVLVAADNVAASSIIQMKHDYDKMFKLSEKILLLCVGEAGDTVQFAEYIQKNVQLYKM 69

  Fly   142 RNKERISVAAASKIMANIAHEY--KGMGLSMGMMLAGYDKR-GPGLYYVDSEGSRTPGNLFSVGS 203
            ||...:|.|||:........:|  ......:.::|||||:. ||||||:|...:.......:.|.
Zfish    70 RNGYELSPAAAANFTRKNLADYLRSRTPYHVNLLLAGYDETDGPGLYYMDYLSALAKAPFAAHGY 134

  Fly   204 GSLYAYGVLDSGYHWDLEDKEAQELGRRAIYHATFRDAYSGGIIRVYHIKEDG 256
            |:.....:||..|..||..:||.:|.::.:.....|...:.....|..|.:||
Zfish   135 GAFLTLSILDRYYRPDLTREEAVDLLKKCLEELNKRFILNLPSFTVRLIDKDG 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta5NP_652014.1 proteasome_beta_type_5 74..261 CDD:239730 48/183 (26%)
psmb2NP_001002609.1 proteasome_beta_type_2 1..192 CDD:239727 48/183 (26%)

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