DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta5 and psma8

DIOPT Version :9

Sequence 1:NP_652014.1 Gene:Prosbeta5 / 45269 FlyBaseID:FBgn0029134 Length:282 Species:Drosophila melanogaster
Sequence 2:NP_998331.1 Gene:psma8 / 406445 ZFINID:ZDB-GENE-040426-2194 Length:251 Species:Danio rerio


Alignment Length:186 Identity:41/186 - (22%)
Similarity:82/186 - (44%) Gaps:24/186 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 GTTTLGFKFKGGVLLAVDSRATGGSYIGSQSMKKIVEINQFMLGTLAGGAADCVYWDRVLSK--- 134
            |:|.:|.:.|..|:|.|:.::. ......::::||..:::.:....||..||.    |::..   
Zfish    31 GSTAVGIRGKDIVVLGVEKKSV-AKLQEERTVRKICALDEHVCMAFAGLTADA----RIVINRAR 90

  Fly   135 -ECRLHELRNKERISVAAASKIMANIAHEY------KGMGLSMGMMLAGYDKRG-PGLYYVDSEG 191
             ||:.|.|..::.::|...::.:|.:...|      :..|:|  .::.|:|..| |.||..|..|
Zfish    91 VECQSHRLTVEDPVTVEYITRYIATLKQRYTQSNGRRPFGIS--ALIVGFDYDGTPRLYQTDPSG 153

  Fly   192 SRTPGNLFSVGSGSLYAYGVLDSGYHWD--LEDKEAQELGRRAIYHATFRDAYSGG 245
            :.......::|..:......|:..|..:  ..|.:|.:|..:|:...    ..|||
Zfish   154 TYHAWKANAIGRSAKTVREFLEKNYTDEAIASDNDAIKLAIKALLEV----VQSGG 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta5NP_652014.1 PTZ00488 38..272 CDD:185666 41/186 (22%)
proteasome_beta_type_5 74..261 CDD:239730 40/185 (22%)
psma8NP_998331.1 proteasome_alpha_type_7 5..213 CDD:239724 41/186 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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