DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosbeta5 and psma7

DIOPT Version :10

Sequence 1:NP_652014.1 Gene:Prosbeta5 / 45269 FlyBaseID:FBgn0029134 Length:282 Species:Drosophila melanogaster
Sequence 2:NP_989071.1 Gene:psma7 / 394668 XenbaseID:XB-GENE-974596 Length:248 Species:Xenopus tropicalis


Alignment Length:222 Identity:50/222 - (22%)
Similarity:101/222 - (45%) Gaps:21/222 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 GTTTLGFKFKGGVLLAVDSRATGGSYIGSQSMKKIVEINQFMLGTLAGGAADCVYWDRVLSK--- 134
            |:|.:|.:.|..|:|.|:.::. ......::::||..:::.:....||..||.    |::..   
 Frog    29 GSTAVGVRGKEIVVLGVEKKSV-AKLQDERTVRKICALDENVFMAFAGLTADA----RIVINRAR 88

  Fly   135 -ECRLHELRNKERISVAAASKIMANIAHEY------KGMGLSMGMMLAGYDKRG-PGLYYVDSEG 191
             ||:.|.|..::.::|...::.:|::...|      :..|:|  .::.|:|..| |.||..|..|
 Frog    89 VECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGIS--ALIVGFDFDGTPRLYQTDPSG 151

  Fly   192 SRTPGNLFSVGSGSLYAYGVLDSGYHWDLEDKEAQELGRRAIYHATFRDAYSGG-IIRVYHIKED 255
            :.......::|.|:......|:.  |:..|..|..:|..:.:..|......||| .|.:..::.|
 Frog   152 TYHAWKANAIGRGAKSVREFLEK--HYTDEAIETDDLTIKLVIKALLEVVQSGGKNIELAVMRRD 214

  Fly   256 GWVNISNTDCMELHYMYQEQLKQQAAK 282
            ..:.|.|.:.:|.:....|:.|::..|
 Frog   215 QPLKILNPEEIERYVAEIEKEKEENEK 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta5NP_652014.1 proteasome_beta_type_5 74..261 CDD:239730 43/198 (22%)
psma7NP_989071.1 proteasome_alpha_type_7 3..211 CDD:239724 43/190 (23%)

Return to query results.
Submit another query.