DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta5 and Prosalpha6T

DIOPT Version :10

Sequence 1:NP_652014.1 Gene:Prosbeta5 / 45269 FlyBaseID:FBgn0029134 Length:282 Species:Drosophila melanogaster
Sequence 2:NP_609623.1 Gene:Prosalpha6T / 34726 FlyBaseID:FBgn0032492 Length:289 Species:Drosophila melanogaster


Alignment Length:175 Identity:41/175 - (23%)
Similarity:74/175 - (42%) Gaps:26/175 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 GTTTLGFKFKGGVLLAVDSRATGGSYIGSQSMKKIVEINQFMLGTLAGGAAD----CVYWDRVLS 133
            |..|:|.|.....:||...|.:..:   :...:||:.::..:..::||..||    |.|    :.
  Fly    32 GAATVGLKGTDYAVLAALCRTSKDT---NTLQRKIMPVDDHVGMSIAGLTADARVVCQY----MR 89

  Fly   134 KECRLHELRNKERISVAAASKIMANIAHE-------YKGMGLSMGMMLAGYDKRGPGLYYVDSEG 191
            .||..:.........|   .::::|:.::       |......:|:::||||::||.:|.|....
  Fly    90 TECMAYRHSYNAEFPV---RRLVSNLGNKLQTTTQRYDRRPYGVGLLVAGYDEQGPHIYQVMPTA 151

  Fly   192 SRTPGNLFSVGSGSLYAYGVLDSGYHWDLEDKEAQELGRRAIYHA 236
            :.......::||.|..|...|:.... ..||.:..||    |.||
  Fly   152 NVLNCKAMAIGSRSQSARTYLERNME-SFEDCDMDEL----ICHA 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta5NP_652014.1 proteasome_beta_type_5 74..261 CDD:239730 40/174 (23%)
Prosalpha6TNP_609623.1 proteasome_alpha_type_1 6..215 CDD:239718 41/175 (23%)

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