DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta5 and psma4

DIOPT Version :9

Sequence 1:NP_652014.1 Gene:Prosbeta5 / 45269 FlyBaseID:FBgn0029134 Length:282 Species:Drosophila melanogaster
Sequence 2:NP_999862.1 Gene:psma4 / 326687 ZFINID:ZDB-GENE-040426-1932 Length:261 Species:Danio rerio


Alignment Length:177 Identity:45/177 - (25%)
Similarity:71/177 - (40%) Gaps:19/177 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 NPLHNLNQIQANGDKTGVKINFDHGTTTLGFKFKGGVLLAVDSRATGGSYIGSQSMKKIVEINQF 113
            :|...|.|::...:..|      |..|.||.....|||||.:.|............:||.::|:.
Zfish    13 SPEGRLYQVEYAMEAIG------HAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLNED 71

  Fly   114 MLGTLAGGAADCVYWDRVLSKECRL----HELRNKERISVAAASKIMANIAHEYKGMG----LSM 170
            |..::||..:|.    .||:.|.||    :.|:.:|.|........:.:|...|...|    ..:
Zfish    72 MACSVAGITSDA----NVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGV 132

  Fly   171 GMMLAGYDKR-GPGLYYVDSEGSRTPGNLFSVGSGSLYAYGVLDSGY 216
            .::..|:||. |..||..|..|:........:|:.|..|..:|...|
Zfish   133 SLLYMGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDY 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta5NP_652014.1 PTZ00488 38..272 CDD:185666 45/177 (25%)
proteasome_beta_type_5 74..261 CDD:239730 40/152 (26%)
psma4NP_999862.1 PTZ00246 1..237 CDD:173491 45/177 (25%)
proteasome_alpha_type_4 3..216 CDD:239721 45/177 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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