DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosbeta5 and psmb8a

DIOPT Version :10

Sequence 1:NP_652014.1 Gene:Prosbeta5 / 45269 FlyBaseID:FBgn0029134 Length:282 Species:Drosophila melanogaster
Sequence 2:NP_571467.3 Gene:psmb8a / 30666 ZFINID:ZDB-GENE-990415-141 Length:271 Species:Danio rerio


Alignment Length:210 Identity:123/210 - (58%)
Similarity:167/210 - (79%) Gaps:0/210 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 GVKINFDHGTTTLGFKFKGGVLLAVDSRATGGSYIGSQSMKKIVEINQFMLGTLAGGAADCVYWD 129
            ||.|:.:||||||.|||:.||::||||||:.|.||.|:...|::|||.::|||::|.||||.||:
Zfish    59 GVCIDLNHGTTTLAFKFRHGVIVAVDSRASAGKYIASKEANKVIEINPYLLGTMSGSAADCQYWE 123

  Fly   130 RVLSKECRLHELRNKERISVAAASKIMANIAHEYKGMGLSMGMMLAGYDKRGPGLYYVDSEGSRT 194
            |:|:|||||::||||:||||:||||:::|:...|:|||||||.|:.|:||:||||||||..|:|.
Zfish   124 RLLAKECRLYKLRNKQRISVSAASKLLSNMMLGYRGMGLSMGSMICGWDKQGPGLYYVDDNGTRL 188

  Fly   195 PGNLFSVGSGSLYAYGVLDSGYHWDLEDKEAQELGRRAIYHATFRDAYSGGIIRVYHIKEDGWVN 259
            .|.:||.|.|:.|||||:||||..|:..:||.|||||.|.|||.|||||||::.:||::||||:.
Zfish   189 SGRMFSTGCGNSYAYGVVDSGYREDMTVEEAYELGRRGIAHATHRDAYSGGVVNLYHMQEDGWIK 253

  Fly   260 ISNTDCMELHYMYQE 274
            :...|..||.:.|::
Zfish   254 VCKEDVSELIHRYKK 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta5NP_652014.1 proteasome_beta_type_5 74..261 CDD:239730 114/186 (61%)
psmb8aNP_571467.3 proteasome_beta_type_5 68..255 CDD:239730 114/186 (61%)

Return to query results.
Submit another query.