DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta5 and Psmb2

DIOPT Version :10

Sequence 1:NP_652014.1 Gene:Prosbeta5 / 45269 FlyBaseID:FBgn0029134 Length:282 Species:Drosophila melanogaster
Sequence 2:NP_058980.1 Gene:Psmb2 / 29675 RGDID:61874 Length:201 Species:Rattus norvegicus


Alignment Length:189 Identity:49/189 - (25%)
Similarity:84/189 - (44%) Gaps:3/189 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 LGFKFKGGVLLAVDSRATGGSYIGSQSMKKIVEINQFMLGTLAGGAADCVYWDRVLSKECRLHEL 141
            :|.:....||:|.|..|............|:.::::.:|....|.|.|.|.:...:.|..:|:::
  Rat     5 IGIQGPDYVLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKNVQLYKM 69

  Fly   142 RNKERIS-VAAASKIMANIAHEYKG-MGLSMGMMLAGYDK-RGPGLYYVDSEGSRTPGNLFSVGS 203
            ||...:| .|||:....|:|...:. ....:.::|||||: .||.|||:|...:.......:.|.
  Rat    70 RNGYELSPTAAANFTRRNLADCLRSRTPYHVNLLLAGYDEHEGPALYYMDYLAALAKAPFAAHGY 134

  Fly   204 GSLYAYGVLDSGYHWDLEDKEAQELGRRAIYHATFRDAYSGGIIRVYHIKEDGWVNISN 262
            |:.....:||..|...:..:.|.||.|:.:.....|...:.....|..|.:||..|:.|
  Rat   135 GAFLTLSILDRYYTPTISRERAVELLRKCLEELQKRFILNLPTFSVRVIDKDGIHNLEN 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta5NP_652014.1 proteasome_beta_type_5 74..261 CDD:239730 48/186 (26%)
Psmb2NP_058980.1 proteasome_beta_type_2 1..192 CDD:239727 48/186 (26%)

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