DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta5 and Psma5

DIOPT Version :9

Sequence 1:NP_652014.1 Gene:Prosbeta5 / 45269 FlyBaseID:FBgn0029134 Length:282 Species:Drosophila melanogaster
Sequence 2:NP_036097.1 Gene:Psma5 / 26442 MGIID:1347009 Length:241 Species:Mus musculus


Alignment Length:225 Identity:49/225 - (21%)
Similarity:99/225 - (44%) Gaps:41/225 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 GTTTLGFKFKGGVLLAVDSRATGGSYIGSQSMKKIVEINQFMLGTLAGGAADCVYWDRVLSKECR 137
            |:|.:|.:...||.|||:.|.| ...:...|::|||||:..:...::|..||.    :.|..:.|
Mouse    34 GSTAIGIQTSEGVCLAVEKRIT-SPLMEPSSIEKIVEIDAHIGCAMSGLIADA----KTLIDKAR 93

  Fly   138 L----HELRNKERISVAAASKIMANIAHEY---------KGMGLSMGMMLAGYDKRGPGLYYVDS 189
            :    |.....|.::|.:.::.::|:|.::         ......:.::..|.|::||.|:::|.
Mouse    94 VETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGPQLFHMDP 158

  Fly   190 EGSRTPGNLFSVGSGSLYAYGVLDSGYHWDLEDKEAQELGRRAIYHATFRDAYSGGIIRVYHIKE 254
            .|:....:..::||.|..|...|...||..:                |.::|....:|.:..:.|
Mouse   159 SGTFVQCDARAIGSASEGAQSSLQEVYHKSM----------------TLKEAIKSSLIILKQVME 207

  Fly   255 DGWVNISNTDC------MELHYMYQEQLKQ 278
            :. :|.:|.:.      ...|...:|:|::
Mouse   208 EK-LNATNIELATVQPGQNFHMFTKEELEE 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta5NP_652014.1 PTZ00488 38..272 CDD:185666 47/217 (22%)
proteasome_beta_type_5 74..261 CDD:239730 44/199 (22%)
Psma5NP_036097.1 proteasome_alpha_type_5 8..220 CDD:239722 46/207 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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