DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosbeta5 and pup1

DIOPT Version :10

Sequence 1:NP_652014.1 Gene:Prosbeta5 / 45269 FlyBaseID:FBgn0029134 Length:282 Species:Drosophila melanogaster
Sequence 2:NP_594544.1 Gene:pup1 / 2541805 PomBaseID:SPAC23D3.07 Length:267 Species:Schizosaccharomyces pombe


Alignment Length:183 Identity:61/183 - (33%)
Similarity:91/183 - (49%) Gaps:1/183 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 GTTTLGFKFKGGVLLAVDSRATGGSYIGSQSMKKIVEINQFMLGTLAGGAADCVYWDRVLSKECR 137
            |||.:|...|..::|..|:|||.|..|..::.||:..|:..:....||.|||..:...::|....
pombe    35 GTTIVGVIAKDCIVLGADTRATAGPIIADKNCKKLHLISPNIWCAGAGTAADTEFVTSMISSNIE 99

  Fly   138 LHELRNKERISVAAASKIMANIAHEYKGMGLSMGMMLAGYDKRGPGLYYVDSEGSRTPGNLFSVG 202
            ||.|....:..|..|..::......|:| .:...::|.|||.:||.|:.:.:.||.......::|
pombe   100 LHSLYTNRKPRVVTALTMLKQHLFRYQG-HIGAYLVLGGYDCKGPHLFTIAAHGSSDKLPYVALG 163

  Fly   203 SGSLYAYGVLDSGYHWDLEDKEAQELGRRAIYHATFRDAYSGGIIRVYHIKED 255
            ||||.|..||::.|..|||..||.||.:.||....|.|..||....:..|.|:
pombe   164 SGSLAAISVLETKYQPDLERHEAMELVKEAIEAGIFNDLGSGSNCDLVVIDEE 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta5NP_652014.1 proteasome_beta_type_5 74..261 CDD:239730 60/182 (33%)
pup1NP_594544.1 proteasome_beta_type_7 36..224 CDD:239732 60/182 (33%)
Pr_beta_C 227..>253 CDD:463597
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.