DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosbeta5 and Psmb8

DIOPT Version :9

Sequence 1:NP_652014.1 Gene:Prosbeta5 / 45269 FlyBaseID:FBgn0029134 Length:282 Species:Drosophila melanogaster
Sequence 2:NP_542945.2 Gene:Psmb8 / 24968 RGDID:3426 Length:276 Species:Rattus norvegicus


Alignment Length:279 Identity:138/279 - (49%)
Similarity:198/279 - (70%) Gaps:11/279 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MALAEICKISNAPYMRPNAWSSADVEEEQKGLMCNLAN-PYTLAAPPFENP--LHNLNQIQANGD 62
            |||.::|   .||..:...|::.|.   ..||..:..: .:::.||....|  :.....:::.||
  Rat     1 MALLDLC---GAPRGQRPEWAAVDA---GSGLRSDPGHYSFSVQAPELALPRGMQPTEFLRSFGD 59

  Fly    63 --KTGVKINFDHGTTTLGFKFKGGVLLAVDSRATGGSYIGSQSMKKIVEINQFMLGTLAGGAADC 125
              :..|:|...||||||.|||:.||::||||||:.||||.:..:.|::|||.::|||::|.||||
  Rat    60 DQERKVQIEMAHGTTTLAFKFQHGVIVAVDSRASAGSYIATIRVNKVIEINPYLLGTMSGCAADC 124

  Fly   126 VYWDRVLSKECRLHELRNKERISVAAASKIMANIAHEYKGMGLSMGMMLAGYDKRGPGLYYVDSE 190
            .||:|:|:|||||:.|||.|||||:||||:::|:..:|:|||||||.|:.|:||:||||||||..
  Rat   125 QYWERLLAKECRLYYLRNGERISVSAASKLLSNMMLQYRGMGLSMGSMICGWDKKGPGLYYVDDN 189

  Fly   191 GSRTPGNLFSVGSGSLYAYGVLDSGYHWDLEDKEAQELGRRAIYHATFRDAYSGGIIRVYHIKED 255
            |:|..|.:||.|||:.|||||:||||..||..:||.:|.||||.:||.||:||||::.:||:|:|
  Rat   190 GTRLSGQMFSTGSGNTYAYGVMDSGYRQDLSPEEAYDLARRAIVYATHRDSYSGGVVNMYHMKKD 254

  Fly   256 GWVNISNTDCMELHYMYQE 274
            |||.:.:||..:|.:.|:|
  Rat   255 GWVKVESTDVSDLLHKYRE 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta5NP_652014.1 PTZ00488 38..272 CDD:185666 126/238 (53%)
proteasome_beta_type_5 74..261 CDD:239730 114/186 (61%)
Psmb8NP_542945.2 PTZ00488 40..271 CDD:185666 125/230 (54%)
proteasome_beta_type_5 73..260 CDD:239730 114/186 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 271 1.000 Domainoid score I1742
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 294 1.000 Inparanoid score I2671
OMA 1 1.010 - - QHG53702
OrthoDB 1 1.010 - - D396507at33208
OrthoFinder 1 1.000 - - FOG0001305
OrthoInspector 1 1.000 - - mtm8992
orthoMCL 1 0.900 - - OOG6_100897
Panther 1 1.100 - - O PTHR11599
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X647
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.840

Return to query results.
Submit another query.