DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta5 and Psmb6

DIOPT Version :10

Sequence 1:NP_652014.1 Gene:Prosbeta5 / 45269 FlyBaseID:FBgn0029134 Length:282 Species:Drosophila melanogaster
Sequence 2:NP_032972.3 Gene:Psmb6 / 19175 MGIID:104880 Length:238 Species:Mus musculus


Alignment Length:185 Identity:58/185 - (31%)
Similarity:91/185 - (49%) Gaps:2/185 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 GTTTLGFKFKGGVLLAVDSRATGGSYIGSQSMKKIVEINQFMLGTLAGGAADCVYWDRVLSKECR 137
            |||.:..:|.|||:|..|||.|.||||.::...|:..|:..:....:|.|||.......::.:..
Mouse    33 GTTIMAVQFNGGVVLGADSRTTTGSYIANRVTDKLTPIHDHIFCCRSGSAADTQAVADAVTYQLG 97

  Fly   138 LHELRNKERISVAAASKIMANIAHEYKGMGLSMGMMLAGYDKRGPGLYYVDSEGSRTPGNLFSV- 201
            .|.:...|...|..|:.:...:.:.|: ..|..|:::||:|.:..|..|....|.......|:: 
Mouse    98 FHSIELNEPPLVHTAASLFKEMCYRYR-EDLMAGIIIAGWDPQEGGQVYSVPMGGMMVRQSFAIG 161

  Fly   202 GSGSLYAYGVLDSGYHWDLEDKEAQELGRRAIYHATFRDAYSGGIIRVYHIKEDG 256
            ||||.|.||.:|:.|...:...|..:....|:..|..||..|||:||:..|:|.|
Mouse   162 GSGSSYIYGYVDATYREGMTKDECLQFTANALALAMERDGSSGGVIRLAAIQESG 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta5NP_652014.1 proteasome_beta_type_5 74..261 CDD:239730 57/184 (31%)
Psmb6NP_032972.3 proteasome_beta_type_6 34..221 CDD:239731 57/184 (31%)

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