DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta5 and Psmb5

DIOPT Version :10

Sequence 1:NP_652014.1 Gene:Prosbeta5 / 45269 FlyBaseID:FBgn0029134 Length:282 Species:Drosophila melanogaster
Sequence 2:NP_035316.1 Gene:Psmb5 / 19173 MGIID:1194513 Length:264 Species:Mus musculus


Alignment Length:235 Identity:137/235 - (58%)
Similarity:182/235 - (77%) Gaps:19/235 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 TLAAPPF---ENPLHNLNQIQANGDKTGVKINFDHGTTTLGFKFKGGVLLAVDSRATGGSYIGSQ 102
            :||||.:   |.|                :|...||||||.|||..||::|.|||||.|:||.||
Mouse    40 SLAAPSWGVPEEP----------------RIEMLHGTTTLAFKFLHGVIVAADSRATAGAYIASQ 88

  Fly   103 SMKKIVEINQFMLGTLAGGAADCVYWDRVLSKECRLHELRNKERISVAAASKIMANIAHEYKGMG 167
            ::||::|||.::|||:|||||||.:|:|:|:::||::|||||||||||||||::||:.::|||||
Mouse    89 TVKKVIEINPYLLGTMAGGAADCSFWERLLARQCRIYELRNKERISVAAASKLLANMVYQYKGMG 153

  Fly   168 LSMGMMLAGYDKRGPGLYYVDSEGSRTPGNLFSVGSGSLYAYGVLDSGYHWDLEDKEAQELGRRA 232
            ||||.|:.|:||||||||||||||:|..|..|||||||:|||||:|.||.:||:.:||.:|.|||
Mouse   154 LSMGTMICGWDKRGPGLYYVDSEGNRISGTAFSVGSGSVYAYGVMDRGYSYDLKVEEAYDLARRA 218

  Fly   233 IYHATFRDAYSGGIIRVYHIKEDGWVNISNTDCMELHYMY 272
            ||.||:|||||||.:.:||::||||:.:|:.:..:||..|
Mouse   219 IYQATYRDAYSGGAVNLYHVREDGWIRVSSDNVADLHDKY 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta5NP_652014.1 proteasome_beta_type_5 74..261 CDD:239730 124/186 (67%)
Psmb5NP_035316.1 proteasome_beta_type_5 60..247 CDD:239730 124/186 (67%)

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