DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta5 and Psma3

DIOPT Version :10

Sequence 1:NP_652014.1 Gene:Prosbeta5 / 45269 FlyBaseID:FBgn0029134 Length:282 Species:Drosophila melanogaster
Sequence 2:NP_035314.3 Gene:Psma3 / 19167 MGIID:104883 Length:255 Species:Mus musculus


Alignment Length:276 Identity:56/276 - (20%)
Similarity:100/276 - (36%) Gaps:64/276 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 MCNLANPYTLAAPPFENPLHNLNQIQANGDKTGVKINFDHGTTTLGFKFKGGVLLAVDSRATGGS 97
            |.::...|.|:|..| :|...:.|::     ..:|. .::.:|.:|.:.|.||:..|:.......
Mouse     1 MSSIGTGYDLSASTF-SPDGRVFQVE-----YAMKA-VENSSTAIGIRCKDGVVFGVEKLVLSKL 58

  Fly    98 YIGSQSMKKIVEINQFMLGTLAGGAADCVYWDRVLSKECRLHELRNKERISVAAASKIMANIAHE 162
            | ...|.|::..:::.:...:||..||......:..:|...........|.:...:..:|...|.
Mouse    59 Y-EEGSNKRLFNVDRHVGMAVAGLLADARSLADIAREEASNFRSNFGYNIPLKHLADRVAMYVHA 122

  Fly   163 Y------KGMGLSMGMMLAGYDKR-GPGLYYVDSEGSRTPGNLFSVGSGSLYAYGVLDSGYHWDL 220
            |      :..|.|  .||..|... |..||.:|..|               .:||      :|..
Mouse   123 YTLYSAVRPFGCS--FMLGSYSANDGAQLYMIDPSG---------------VSYG------YWGC 164

  Fly   221 EDKEAQ-----ELGRRAIYHATFRDAYS--GGIIRVYH--IK------EDGWVNISNTDCMEL-- 268
            ...:|:     |:.:..:...|.||...  ..||.:.|  :|      |..||.       ||  
Mouse   165 AIGKARQAAKTEIEKLQMKEMTCRDVVKEVAKIIYIVHDEVKDKAFELELSWVG-------ELTK 222

  Fly   269 --HYMYQEQLKQQAAK 282
              |.:..:.::::|.|
Mouse   223 GRHEIVPKDIREEAEK 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta5NP_652014.1 proteasome_beta_type_5 74..261 CDD:239730 43/208 (21%)
Psma3NP_035314.3 proteasome_alpha_type_3 5..217 CDD:239720 48/242 (20%)

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