DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta5 and pas-1

DIOPT Version :9

Sequence 1:NP_652014.1 Gene:Prosbeta5 / 45269 FlyBaseID:FBgn0029134 Length:282 Species:Drosophila melanogaster
Sequence 2:NP_506571.1 Gene:pas-1 / 179941 WormBaseID:WBGene00003922 Length:246 Species:Caenorhabditis elegans


Alignment Length:203 Identity:44/203 - (21%)
Similarity:81/203 - (39%) Gaps:10/203 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 TTLGFKFKGGVLLAVDSRATGGSYIGSQSMKKIVEINQFMLGTLAGGAADCVYWDRVLSKECRLH 139
            |.:..|.....::||..|.. .|.|.:.::..:.:|:|.:.....|...|..:..:....|....
 Worm    38 TAVAVKGADAAVIAVQKRVP-DSLIVADTVTSVYQISQSVGCCAIGMIPDAKFQIKRAQGEAASW 101

  Fly   140 ELRNKERISVAAASKIMANIAHEY------KGMGLSMGMMLAGYDKRGPGLYYVDSEGSRTPGNL 198
            :.:|...:.....:|.||::...|      :.:|.:: :.::..|::||.:|.||..|.......
 Worm   102 KYKNGYDMPCELLAKKMADLNQYYTQNAEMRSLGCAL-LFISYDDEKGPEVYRVDPAGYYRGMKG 165

  Fly   199 FSVGSGSLYAYGVLDSGY--HWDLEDKEAQELGRRAIYHATFRDAYSGGIIRVYHIKEDGWVNIS 261
            .|||...|.|...|:...  ..:|...||.||...|:..:...|..|..:..|...|::......
 Worm   166 VSVGVKQLPATSFLEKKIKKKSELTSTEAIELAIEALQTSLGIDVRSKDLEVVVVTKDNSKFTKL 230

  Fly   262 NTDCMELH 269
            .:|.:|.|
 Worm   231 TSDQVEHH 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta5NP_652014.1 PTZ00488 38..272 CDD:185666 44/203 (22%)
proteasome_beta_type_5 74..261 CDD:239730 41/193 (21%)
pas-1NP_506571.1 PRE1 7..245 CDD:223711 44/203 (22%)
proteasome_alpha_type_6 8..220 CDD:239723 40/183 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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