DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosbeta5 and pbs-6

DIOPT Version :9

Sequence 1:NP_652014.1 Gene:Prosbeta5 / 45269 FlyBaseID:FBgn0029134 Length:282 Species:Drosophila melanogaster
Sequence 2:NP_498806.1 Gene:pbs-6 / 176161 WormBaseID:WBGene00003952 Length:258 Species:Caenorhabditis elegans


Alignment Length:282 Identity:61/282 - (21%)
Similarity:103/282 - (36%) Gaps:82/282 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 WSSADVEEEQKGLMCNLANPYTLAAPPFENPLHNLNQIQANGDKTGVKINFDHGTTTLGFKFKGG 84
            |.|:...|.|:.      |||::                             .|.:|.....:..
 Worm    33 WMSSRQIERQRW------NPYSM-----------------------------EGGSTCAISGENF 62

  Fly    85 VLLAVDSRATGGSY-IGSQSMKKIVEINQFMLGTLAGGAADCVYWDRVLSKECRLHELRNKER-- 146
            .::|.|:|.|.... |.::..:||..:|..::.|.:|...|.:...:||  :.|||:.|...|  
 Worm    63 AIVASDTRMTQNDINILTRDAEKIQILNDNIILTTSGFYGDVLQLKKVL--QSRLHKYRFDYRSD 125

  Fly   147 ISVAAASKIMANIAHEYKGMGLSMGMMLAGYDKRGPGLYYVDSEGSRTP-GNLFSVG---SGSL- 206
            :||...:::::...:..:......|.:|||.|:.|.|..:     |..| |.:..:|   ||:. 
 Worm   126 MSVDLCAELLSRNLYYRRFFPYYTGAILAGIDEHGKGAVF-----SYDPIGCIERLGYSASGAAE 185

  Fly   207 ----------YAYGVLDSGYHWDLEDKEAQELG-RRAIYHATFRDAYSGGIIRVYHIKEDGWVNI 260
                      ..:..|..||       |..||. .|||  :..:|::.|...|          .|
 Worm   186 PMIIPFLDCQIGHVTLSEGY-------ERPELTLDRAI--SLMKDSFRGAAER----------EI 231

  Fly   261 SNTDCMELHYMYQEQLKQQAAK 282
            |..|  ::|.:..|..|....|
 Worm   232 STGD--KIHLVIAEAGKPVVVK 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta5NP_652014.1 PTZ00488 38..272 CDD:185666 54/252 (21%)
proteasome_beta_type_5 74..261 CDD:239730 46/205 (22%)
pbs-6NP_498806.1 PRE1 38..246 CDD:223711 57/270 (21%)
Ntn_hydrolase 44..258 CDD:294319 57/271 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.