DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cathD and BAR1

DIOPT Version :9

Sequence 1:NP_001334713.1 Gene:cathD / 45268 FlyBaseID:FBgn0029093 Length:392 Species:Drosophila melanogaster
Sequence 2:NP_012249.1 Gene:BAR1 / 854797 SGDID:S000001277 Length:587 Species:Saccharomyces cerevisiae


Alignment Length:404 Identity:105/404 - (25%)
Similarity:165/404 - (40%) Gaps:117/404 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 EPLSNYMDAQYYG-PIAIGSPPQNFRVVFDTGSSNLWV-------------PSKKCHLT------ 107
            |.|..:.:..||. .:.||:|.|:..|:|||||::.||             .|...:.|      
Yeast    34 EFLLQHEEEMYYATTLDIGTPSQSLTVLFDTGSADFWVMDSSNPFCLPNSNTSSYSNATYNGEEV 98

  Fly   108 --NIACLMHNKYDASKSKT--YTKNGTEFAIQYGSGSLS-GYLSTDTVSIAGLDIKDQTFAEALS 167
              :|.|...:.|:..:|.|  |.:|| .|.|.|..|:.: |...|:||||.|:||          
Yeast    99 KPSIDCRSMSTYNEHRSSTYQYLENG-RFYITYADGTFADGSWGTETVSINGIDI---------- 152

  Fly   168 EPGLVFVAAKF-----DGILGLGY---NSISVDKVKP-PFYAMYEQ-----GLISAPVFSFYLNR 218
             |.:.|..||:     .|:||:|:   .|:...:..| .:|..:.|     .:|....:|.:|| 
Yeast   153 -PNIQFGVAKYATTPVSGVLGIGFPRRESVKGYEGAPNEYYPNFPQILKSEKIIDVVAYSLFLN- 215

  Fly   219 DPASPEG--GEIIFGGSDPNHYTGE-FTY-----LPVTRKAYWQIKMDAASIGDLQLCKGGCQ-- 273
               ||:.  |.|:||..|.:.::|: ||:     .|....|...:.|....:|...  |..|:  
Yeast   216 ---SPDSGTGSIVFGAIDESKFSGDLFTFPMVNEYPTIVDAPATLAMTIQGLGAQN--KSSCEHE 275

  Fly   274 --------VIADTGTSLIAAPL----EEATSINQKIGGTPIIGGQYVVSC--------------D 312
                    |:.|:||||:.||.    :.|:.:|.......   |.|::.|              |
Yeast   276 TFTTTKYPVLLDSGTSLLNAPKVIADKMASFVNASYSEEE---GIYILDCPVSVGDVEYNFDFGD 337

  Fly   313 LIPQLPVIKFVLGGKTFELEGKDYILRVAQMGKTICLSGFMGLDIPPPNGPLWILGDVFIGKYYT 377
            |...:|:...:|..:|   ||                 .:.|..:.|.|..: :|||||:...|.
Yeast   338 LQISVPLSSLILSPET---EG-----------------SYCGFAVQPTNDSM-VLGDVFLSSAYV 381

  Fly   378 EFDMGNDRVGFADA 391
            .||:.|.::..|.|
Yeast   382 VFDLDNYKISLAQA 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cathDNP_001334713.1 None
BAR1NP_012249.1 SAP_like 43..395 CDD:133141 102/393 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1339
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S917
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000066
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X163
TreeFam 1 0.960 - -
65.720

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