DRSC/TRiP Functional Genomics Resources

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Protein Alignment cathD and YPS1

DIOPT Version :9

Sequence 1:NP_001334713.1 Gene:cathD / 45268 FlyBaseID:FBgn0029093 Length:392 Species:Drosophila melanogaster
Sequence 2:NP_013221.1 Gene:YPS1 / 850811 SGDID:S000004110 Length:569 Species:Saccharomyces cerevisiae


Alignment Length:480 Identity:105/480 - (21%)
Similarity:171/480 - (35%) Gaps:127/480 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 AAAVAHPNSQEKPGLLRVPLHKFQSARRHFADVGTELQ-QLRIRYGGGDVPEPLSNYMDAQYYGP 76
            ||.....:|..|  .:::|.||...  ....:||::.: ::|:........|.:.....:.|...
Yeast    26 AANKRDDDSNSK--FVKLPFHKLYG--DSLENVGSDKKPEVRLLKRADGYEEIIITNQQSFYSVD 86

  Fly    77 IAIGSPPQNFRVVFDTGSSNLW------------------------------------------- 98
            :.:|:||||..|:.|||||:||                                           
Yeast    87 LEVGTPPQNVTVLVDTGSSDLWIMGSDNPYCSSNSMGSSRRRVIDKRDDSSSGGSLINDINPFGW 151

  Fly    99 -------------------------VPSKKCHLTNIACLMHNKYDASKSKTYTKNGTEFAIQYGS 138
                                     ||:.:   ..:.|..:..:..|.|.|:..|.|.|:|.||.
Yeast   152 LTGTGSAIGPTATGLGGGSGTATQSVPASE---ATMDCQQYGTFSTSGSSTFRSNNTYFSISYGD 213

  Fly   139 GSL-SGYLSTDTVSIAGLDIKDQTFAEALSEPGLVFVAAKFDGILGLGYNSISV--------DKV 194
            |:. ||...||.:.::.|::...:||.|......:       |:||:|...:.|        ...
Yeast   214 GTFASGTFGTDVLDLSDLNVTGLSFAVANETNSTM-------GVLGIGLPELEVTYSGSTASHSG 271

  Fly   195 KPPFY-----AMYEQGLISAPVFSFYLNRDPASPEGGEIIFGGSDPNHYTGEFTYLPV------- 247
            |...|     .:...|.|.:..:|.|||...|.  .|.|:||..|.:.|||....:|:       
Yeast   272 KAYKYDNFPIVLKNSGAIKSNTYSLYLNDSDAM--HGTILFGAVDHSKYTGTLYTIPIVNTLSAS 334

  Fly   248 --TRKAYWQIKMDAASIGD-----LQLCKGGCQVIADTGTSLIAAPLEEATSINQKIG---GTPI 302
              :....:.:.::...|.|     ..|.......:.|:||:|...|....:.|..::|   .:.|
Yeast   335 GFSSPIQFDVTINGIGISDSGSSNKTLTTTKIPALLDSGTTLTYLPQTVVSMIATELGAQYSSRI 399

  Fly   303 IGGQYVVSCDLIPQLPVIKFVLGGKTFELEGKDYILRVAQMGKTICLSGFMGLDIPPPNGPLWIL 367
              |.||:.|.....:.:: |..||.........:||...    |.||.|.    ||..:....||
Yeast   400 --GYYVLDCPSDDSMEIV-FDFGGFHINAPLSSFILSTG----TTCLLGI----IPTSDDTGTIL 453

  Fly   368 GDVFIGKYYTEFDMGNDRVGFADAK 392
            ||.|:...|..:|:.|..:..|.|:
Yeast   454 GDSFLTNAYVVYDLENLEISMAQAR 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cathDNP_001334713.1 None
YPS1NP_013221.1 SAP_like 81..477 CDD:133141 93/418 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1339
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000066
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X163
TreeFam 1 0.960 - -
54.770

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